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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_010526885.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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| Family |
bHLH |
| Protein Properties |
Length: 306aa MW: 34300 Da PI: 4.4379 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010526885.1 | genome | NCBI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 31 | 4.5e-10 | 133 | 176 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++Er R++ +N+ + +Lr+l+P+ +Kl+ +i A++YIk+Lq
XP_010526885.1 133 MAERMRMRLLNDNLYKLRSLIPNV-----TKLDRKSIMLGAIDYIKKLQ 176
79*********************8.....8******************9 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MRHGSSGDVI EIWELKHIKL LGKIRTLVGL DYFVVRSFWF VKLLGGYCGR AEEMIDENNG 60
GEGFLPNNKQ MDMDMLTEVA EDDVPLGMEA LTSSMGNVAL NTHHVAECGN PSLPVKEQQD 120
VDDEEEQGEN QMMAERMRMR LLNDNLYKLR SLIPNVTKLD RKSIMLGAID YIKKLQKEVK 180
ELQEELEKNS DTEDGSDQHR QGGGMSSVNG ADNELMMKGG GVFEPQVELA MVKVDGSYEF 240
SVKVICEYKP GGFTKLMEAL DSLELVVINA NTTRSLDLVS NVFMAERKDG EMVQVDHVKD 300
SQLQIT
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Plays a crucial role in tapetum development. Required for male fertility and pollen differentiation, especially during the post-meiotic transcriptional regulation of microspore development within the developing anther (PubMed:12535353). Binds E-box regions in the AHL16/TEK promoter. {ECO:0000269|PubMed:12535353, ECO:0000269|PubMed:24804694}. |
| Publications
? help Back to Top |
- Skinner MK,Rawls A,Wilson-Rawls J,Roalson EH
Basic helix-loop-helix transcription factor gene family phylogenetics and nomenclature.
Differentiation, 2010. 80(1): p. 1-8
[PMID:20219281] - Jiang J,Zhang Z,Cao J
Pollen wall development: the associated enzymes and metabolic pathways.
Plant Biol (Stuttg), 2013. 15(2): p. 249-63
[PMID:23252839] - Xu J, et al.
ABORTED MICROSPORES Acts as a Master Regulator of Pollen Wall Formation in Arabidopsis.
Plant Cell, 2014. 26(4): p. 1544-1556
[PMID:24781116] - Qian H, et al.
Trace concentrations of imazethapyr (IM) affect floral organs development and reproduction in Arabidopsis thaliana: IM-induced inhibition of key genes regulating anther and pollen biosynthesis.
Ecotoxicology, 2015. 24(1): p. 163-71
[PMID:25348600] - Xiong SX, et al.
The transcription factors MS188 and AMS form a complex to activate the expression of CYP703A2 for sporopollenin biosynthesis in Arabidopsis thaliana.
Plant J., 2016. 88(6): p. 936-946
[PMID:27460657] - Ferguson AC, et al.
Biphasic regulation of the transcription factor ABORTED MICROSPORES (AMS) is essential for tapetum and pollen development in Arabidopsis.
New Phytol., 2017. 213(2): p. 778-790
[PMID:27787905] - Lou Y, et al.
Positive regulation of AMS by TDF1 and the formation of a TDF1-AMS complex are required for anther development in Arabidopsis thaliana.
New Phytol., 2018. 217(1): p. 378-391
[PMID:28940573] - Bi H,Fan W,Zhang P
C4 Protein of Sweet Potato Leaf Curl Virus Regulates Brassinosteroid Signaling Pathway through Interaction with AtBIN2 and Affects Male Fertility in Arabidopsis.
Front Plant Sci, 2017. 8: p. 1689
[PMID:29021807]
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