PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010526773.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family bZIP
Protein Properties Length: 167aa    MW: 18842.1 Da    PI: 8.4451
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010526773.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_138.42.6e-122381563
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                    ++ +r+ +NRe+ArrsR RK+++++ L+  + +L++ N++    l   ++++ k+++e+
  XP_010526773.1 23 RKRKRMVSNRESARRSRMRKQKQLDDLTAQINQLTNDNRQIMTSLTVTTQLYMKVQAEN 81
                    577999*********************************99988888888888877766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.0E-151983IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.1E-92165No hitNo description
PROSITE profilePS5021710.142184IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.65E-112374No hitNo description
PfamPF001706.6E-92374IPR004827Basic-leucine zipper domain
CDDcd147027.48E-192475No hitNo description
PROSITE patternPS0003602641IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MASSSSTYRS SSPVSNGAVV DERKRKRMVS NRESARRSRM RKQKQLDDLT AQINQLTNDN  60
RQIMTSLTVT TQLYMKVQAE NSVLNAQFSE LNTRLQSLND IIRFLTANTN MSRDGVNDQA  120
MIDGCGFDDR TVGIHDGFYD DTLSVLNPWS GSVYANQPIM ANDIIMY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12243RKRKRMVSNRESARRSRMRKQK
23542RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010526773.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010526773.11e-120PREDICTED: bZIP transcription factor 2
SwissprotQ9SI151e-68BZIP2_ARATH; bZIP transcription factor 2
TrEMBLA0A087HDK24e-73A0A087HDK2_ARAAL; Uncharacterized protein
STRINGXP_010526773.11e-120(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM50128154
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18160.12e-70basic leucine-zipper 2
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]