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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010526700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 249aa MW: 28387.6 Da PI: 7.7014 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.3 | 1.2e-11 | 137 | 184 | 3 | 50 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 e+++ +r+++NRe+ArrsR+RK+ ie L++ + L eN++L +++ XP_010526700.1 137 ERRKRMRMESNRESARRSRKRKQNHIEDLRNQMSRLGVENRELTNRIR 184 56889**************************************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.7E-12 | 134 | 199 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.1E-9 | 136 | 184 | No hit | No description |
PROSITE profile | PS50217 | 10.105 | 137 | 200 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.3E-8 | 137 | 184 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.42E-10 | 139 | 190 | No hit | No description |
CDD | cd14702 | 1.72E-14 | 140 | 187 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 143 | 157 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 249 aa Download sequence Send to blast |
MLSTVPAFSI AEPAFSDFQT GFTHWDWVCS DLFSVIESSL KPAGTDPCSD DPGDHVKQTS 60 GSRNTKPDSD DSIAGSIEMN SGSGYTNAFD GKPSPRHDDQ DSGEMKNLIT GSAECTHNRT 120 EMNGPVSDPT VFQVVDERRK RMRMESNRES ARRSRKRKQN HIEDLRNQMS RLGVENRELT 180 NRIRVVLYHI QRVSTDNNRL VAEQEILRRR LSEMRRILIL KQLQHQWARN HSSVITTEQN 240 PSSIIHQII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 138 | 157 | RKRMRMESNRESARRSRKRK |
2 | 151 | 157 | RRSRKRK |
3 | 151 | 158 | RRSRKRKQ |
4 | 153 | 158 | SRKRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010526700.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010526700.1 | 0.0 | PREDICTED: light-inducible protein CPRF2-like | ||||
TrEMBL | A0A1J3G131 | 2e-76 | A0A1J3G131_NOCCA; Basic leucine zipper 43 (Fragment) | ||||
TrEMBL | A0A1J3G9Q7 | 2e-76 | A0A1J3G9Q7_NOCCA; Basic leucine zipper 43 (Fragment) | ||||
STRING | XP_010526700.1 | 0.0 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM7855 | 18 | 40 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 2e-68 | basic leucine-zipper 6 |