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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010525316.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
CPP |
Protein Properties |
Length: 651aa MW: 70803 Da PI: 4.7818 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010525316.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 51.1 | 2.7e-16 | 367 | 405 | 2 | 40 |
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
++k+CnCkkskClk+YCeCfaag++C e C+C dC+Nk
XP_010525316.1 367 SCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCVDCFNKP 405
689**********************************96 PP
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2 | TCR | 52.3 | 1.1e-16 | 452 | 490 | 1 | 39 |
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
++k+gCnCkks+ClkkYCeCf+ g+ Cs +C+Ce+CkN
XP_010525316.1 452 RHKRGCNCKKSSCLKKYCECFQGGVGCSVNCRCEGCKNA 490
589***********************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 651 aa
Download sequence Send
to blast |
MDTPQKTAAQ IGTPISKSKF EDSPVFNYIN SLSPIKSVKS IPIAQTFGSL SFSSPPSVFT 60 SPHVNSHNES RFFRSHPPPK PEAKSRDGSS AIEEVVTAPE NFSAEASMEE EEAASIEPSN 120 GNFETEPIGD RDSSEVVAMD LQKMCNVKSS KNDTPDWESL ISDSTDLLIF SSPNDSEAFR 180 DLIQPHANNF TSDDPSNGED NESAESDSTD LLIFSSPNDS EAFRDLIQPH ANNFTSDDPS 240 NGEDNESAEA VSNFHRGLRR RCLDFVSPSE PSSRCILPSI GLHLNAIAMS SKDSKASLLN 300 EYSFPGKIHV SLPGANTHSK ENVQETRDED ASQEVEDVSK ASVSEELNPS SPKKKRRKFD 360 QGGEGESCKR CNCKKSKCLK LYCECFAAGV YCIEPCSCVD CFNKPIHEDT VLATRKQIES 420 RNPLAFAPKV IRSSDPISEA GDDASKTPAS ARHKRGCNCK KSSCLKKYCE CFQGGVGCSV 480 NCRCEGCKNA FGRKDGSSGI GSEGEQEEEN DTSEKYVTAK AQQNPEIFNE EEQNQSSGLP 540 STPLPLYRQP LVQLPFPSNN QTVSQSLLGA GSSSSRQFNS FETISEDGTE DDMPEILVRS 600 PIPTVKAVSP NSKRVSPPNL DSSGSILGRR NGGRKLILQS IPSFPSLTPH Q
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 352 | 356 | KKKRR |
2 | 352 | 357 | KKKRRK |
3 | 353 | 357 | KKRRK |
Functional Description ? help
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Source |
Description |
UniProt | Probable floral-specific cell division component, required for proper organ formation in flowers. Regulates the floral meristem cell division and the inflorescence meristem organization. Plays a role in development of both male and female reproductive tissues. {ECO:0000269|PubMed:10769244, ECO:0000269|PubMed:10769245, ECO:0000269|PubMed:9043081, ECO:0000269|PubMed:9725857}. |
Publications
? help Back to Top |
- Lu T,Dou Y,Zhang C
Fuzzy clustering of CPP family in plants with evolution and interaction analyses. BMC Bioinformatics, 2013. 14 Suppl 13: p. S10 [PMID:24268301] - Xie W, et al.
Exploring potential new floral organ morphogenesis genes of Arabidopsis thaliana using systems biology approach. Front Plant Sci, 2015. 6: p. 829 [PMID:26528302] - Wang W,Sijacic P,Xu P,Lian H,Liu Z
Arabidopsis TSO1 and MYB3R1 form a regulatory module to coordinate cell proliferation with differentiation in shoot and root. Proc. Natl. Acad. Sci. U.S.A., 2018. 115(13): p. E3045-E3054 [PMID:29535223]
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