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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
XP_010524963.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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| Family |
NAC |
| Protein Properties |
Length: 354aa MW: 40155.5 Da PI: 7.5716 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010524963.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 166.8 | 7.6e-52 | 10 | 145 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrFhPtdeel+ +yL+kk+++++ ++i++vdiyk++PwdLp+k+ +ekewyfFs+rd+ky++g r+nra++sgyWkatg+dk + ++
XP_010524963.1 10 LPPGFRFHPTDEELILHYLRKKISSSHQVPVSIIADVDIYKFDPWDLPAKAPYGEKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKVIAAA 104
79*********************9999555589***************988889**************************************998 PP
NAM 96 ....kgel......vglkktLvfykgrapkgektdWvmheyrl 128
+ +g+kk Lvfykg+ pkg kt+W+mheyrl
XP_010524963.1 105 anggE--IhrpvekIGVKKALVFYKGKPPKGIKTNWIMHEYRL 145
76550..1455556***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 354 aa
Download sequence Send
to blast |
MISKDPRSSL PPGFRFHPTD EELILHYLRK KISSSHQVPV SIIADVDIYK FDPWDLPAKA 60
PYGEKEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKV IAAAANGGEI HRPVEKIGVK 120
KALVFYKGKP PKGIKTNWIM HEYRLVDSLS PSRLSGCDRG LRSKESSMRL DDWVLCRIYK 180
KTQASPAFMA ATSDQEQEQE EDEEVSITGQ TLLPRLPQLT FPSIMSNDNT LKPPKSSCSF 240
SNPSDPGDLM FLSGFLADNP ENQTEFEFPL MFGSSDLDYG NGYLDQKLPR LTSPPLEKLG 300
TDNKRQRTDF VDEKMNPLKK TMNICGYNNN TMDQFDHSFM NQQLLLSPHL QFQG
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-70 | 9 | 185 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-70 | 9 | 185 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-70 | 9 | 185 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-70 | 9 | 185 | 16 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 1e-70 | 9 | 185 | 19 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 1e-70 | 9 | 185 | 16 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 1e-70 | 9 | 185 | 16 | 169 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor that binds to the promoter of ACO5, an ACC oxidase involved in ethylene biosynthesis. Mediates waterlogging-induced hyponastic leaf movement, and cell expansion in abaxial cells of the basal petiole region, by directly regulating the expression of ACO5 (PubMed:24363315). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000269|PubMed:24363315}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By root flooding (PubMed:24363315). Induced by senescence (PubMed:24659488). {ECO:0000269|PubMed:24363315, ECO:0000269|PubMed:24659488}. |
