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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010524069.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | G2-like | ||||||||
Protein Properties | Length: 239aa MW: 26420.6 Da PI: 8.9609 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 45.7 | 1.4e-14 | 10 | 39 | 26 | 55 |
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPk +l lm++kgL+++hvkSHLQ+YR+ XP_010524069.1 10 EATPKLVLGLMNLKGLSIAHVKSHLQMYRS 39 7****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 1.3E-12 | 9 | 40 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 4.3E-9 | 9 | 41 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MLGFAMEVAE ATPKLVLGLM NLKGLSIAHV KSHLQMYRSK KLDESSNAAR PGMINGKTMR 60 KSGSLLEMLN YGYIPYGEFR HVYNSEAILT RELELRSGNQ ELLMVNPAKG VLADLGVNRL 120 VQPSGLCSGF NGNQWRPVSR SCDGDDSECK TLPLLEIKKT TGEKRRRDKA QLSEELEVIK 180 QAKIISREGN LLPELGLSLC QAFGSCRKQK LGEDIKTMLV LSLFPTSSGD QNMTSNIET |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010524069.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010524069.1 | 1e-176 | PREDICTED: uncharacterized protein LOC104802260 isoform X2 | ||||
STRING | XP_010524068.1 | 1e-166 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42660.1 | 2e-40 | G2-like family protein |