PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010523911.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family C2H2
Protein Properties Length: 278aa    MW: 30738.8 Da    PI: 8.4173
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010523911.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.70.00038213235223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +Cp Cg  Fs+  +L+ H  + H
  XP_010523911.1 213 ECPQCGAKFSSVGSLVEHVEKvH 235
                     5*****************99888 PP
2zf-C2H220.81e-06251272323
                     ETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                     Cp+C+k F+++ +L++Hi + H
  XP_010523911.1 251 CPKCSKGFRDPVDLVKHIERdH 272
                     ******************9988 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183101.91E-11457No hitNo description
PROSITE profilePS510397.8371059IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.104.3E-101049IPR000058Zinc finger, AN1-type
PfamPF014285.9E-131349IPR000058Zinc finger, AN1-type
SMARTSM001544.3E-41352IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.103.3E-1191151IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.44E-993144No hitNo description
PROSITE profilePS510398.22498151IPR000058Zinc finger, AN1-type
PfamPF014288.3E-9101141IPR000058Zinc finger, AN1-type
SMARTSM001540.0016101142IPR000058Zinc finger, AN1-type
SMARTSM003550.0085212235IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.598212240IPR007087Zinc finger, C2H2
SuperFamilySSF576673.96E-5213268No hitNo description
PfamPF138945.6E-4213235No hitNo description
PROSITE patternPS000280214235IPR007087Zinc finger, C2H2
SMARTSM003556.8249272IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.432249277IPR007087Zinc finger, C2H2
PROSITE patternPS000280251272IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MGTPEFPDLG KHCSVDDCKL IDFLPFTCDR CLQVFCLDHR SYIKHSCPKG NRGDVTVVIC  60
PLCAKGVRLN PDEDPNITWE KHVNTDCDPS NYEKATKKKK CPVPRCREAL TFSNTIKCRD  120
CNLDHCLKHR FGPDHNCPGP KKPEQSFPFM GFLSTSSSRK EATKSNRAPT SSNSSSRWSS  180
LLSSAEASLS RLSTDISQKL QFASSSNGGN AEECPQCGAK FSSVGSLVEH VEKVHERNGK  240
HALAKPTIDA CPKCSKGFRD PVDLVKHIER DHRGTSKA
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010523911.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010523911.10.0PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 13-like
SwissprotQ8VZ421e-154SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLA0A1J3INK21e-154A0A1J3INK2_NOCCA; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
STRINGXP_010523911.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM39082754
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-148C2H2 family protein