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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010523639.1 |
Organism |
|
Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
Family |
M-type_MADS |
Protein Properties |
Length: 234aa MW: 26341.7 Da PI: 7.4091 |
Description |
M-type_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010523639.1 | genome | NCBI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 55.4 | 7.7e-18 | 7 | 55 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
r++++ +++ f+kR +++ KA ELSvLCd+ v+ i ++++g+ly ++
XP_010523639.1 7 RSKESKAKETAFAKRVQTLKNKARELSVLCDISVCFICYGPDGQLYHWP 55
67888999****************************************8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 234 aa
Download sequence Send
to blast |
MASKKPRSKE SKAKETAFAK RVQTLKNKAR ELSVLCDISV CFICYGPDGQ LYHWPENPGD 60 VRTIATSYRA LSEENRRKRT VDLNAFLASE NSKTERPKKK RRLASEEPVC DEASNQQHSR 120 EDLRVLLSRI DSKLEEFHGR LSHKMVRGEQ PRGFEGFSGK KDTVFVEPEA TPILGEENRA 180 EIDVFGGLAD LDMGFEGFGH QSSCFGFGDC LLEMDPTLFC HGSSSAVRTN CMRD
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 96 | 102 | PKKKRRL |
2 | 97 | 101 | KKKRR |
3 | 97 | 102 | KKKRRL |