PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010523533.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 434aa MW: 48995 Da PI: 8.7058

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010523533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.9	7.2e-16	364	410	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+k+ +el XP_010523533.1 364 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEKLRKQ-KEL 410 79****************************************64.444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.4E-13	360	432	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.737	362	407	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.2E-14	362	411	No hit	No description
SuperFamily	SSF57959	4.13E-11	364	409	No hit	No description
Pfam	PF00170	3.3E-13	364	408	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.52E-24	364	412	No hit	No description
PROSITE pattern	PS00036	0	367	382	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence Send to blast
MFDGIFFVVF AFFFVSVNET YRGLSFLFFL FGLIFLLSTF LKKKLVSVSP SLRPETSFLF 60 FSGNYSEICI VNSFSLWTIR IIFSSSVVFR FIRFLKFTAF LFFFWVSEIH FSSDFTEKIG 120 SNSTRRTLNS GDFVCMVDLT MGSHVGVRCS VKNDGFEPLA PPSSMYNLTL HEVQSQLGDT 180 GKPLSSMNLD ELLQNVLSAE AANQSVGTEP EDVPPGNQNG STQCRASLSS LTGTLSKKTV 240 DEVWRDIQEQ SKGRGGDRIK ERQPTLGEIT LEDFLVKAGV VSESNVGKEN CGHFPGVDPN 300 IDPQFLMEQH QWMQPMAQPL QARTRLENQA VLPPPPLMGT LSETQVPGRK RGATEEFIGK 360 TVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NEKLRKQKEL EKILPVTPVA 420 ETKYQLRRTS SAPV

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence Send to blast

MFDGIFFVVF AFFFVSVNET YRGLSFLFFL FGLIFLLSTF LKKKLVSVSP SLRPETSFLF  60
FSGNYSEICI VNSFSLWTIR IIFSSSVVFR FIRFLKFTAF LFFFWVSEIH FSSDFTEKIG  120
SNSTRRTLNS GDFVCMVDLT MGSHVGVRCS VKNDGFEPLA PPSSMYNLTL HEVQSQLGDT  180
GKPLSSMNLD ELLQNVLSAE AANQSVGTEP EDVPPGNQNG STQCRASLSS LTGTLSKKTV  240
DEVWRDIQEQ SKGRGGDRIK ERQPTLGEIT LEDFLVKAGV VSESNVGKEN CGHFPGVDPN  300
IDPQFLMEQH QWMQPMAQPL QARTRLENQA VLPPPPLMGT LSETQVPGRK RGATEEFIGK  360
TVERRQKRMI KNRESAARSR ARKQAYTNEL ENKVSRLEEE NEKLRKQKEL EKILPVTPVA  420
ETKYQLRRTS SAPV

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010523533.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010523533.1	0.0	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
Swissprot	Q9LES3	1e-76	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	B9HK82	1e-107	B9HK82_POPTR; Uncharacterized protein
STRING	XP_010523455.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	2e-73	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]