PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010522314.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 187aa MW: 21839.3 Da PI: 8.0168

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010522314.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	45.9	1.3e-14	80	138	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr rr+ +NRe+ArrsR RKk++ieeL+ v++L + N+ L +++ +l + ++ +e+ XP_010522314.1 80 KRIRRMVSNRESARRSRMRKKKQIEELQLQVEQLMTLNHHLSEKVISLLESNHQVLQEN 138 9*******************************************999999888888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.4E-15	76	140	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.162	78	141	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.5E-13	80	136	No hit	No description
Pfam	PF00170	1.8E-13	80	138	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.38E-11	80	132	No hit	No description
CDD	cd14702	1.09E-15	81	132	No hit	No description
PROSITE pattern	PS00036	0	83	98	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence Send to blast
MEPNDRPSHC FNLMEGNPSQ NNHFNSLFLP TNTESHVQLH SVSPNTSTLS NNLSNLDQTR 60 DTIYHHGHHH HQQHSMIDEK RIRRMVSNRE SARRSRMRKK KQIEELQLQV EQLMTLNHHL 120 SEKVISLLES NHQVLQENAQ LKEKVSSFHI LMADMLLPVR NLDDTNSRET DHIRAEPSNR 180 SNNPRAT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010522314.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010522314.1	1e-133	PREDICTED: basic leucine zipper 43
TrEMBL	V4KWU6	4e-64	V4KWU6_EUTSA; Uncharacterized protein
STRING	XP_010522314.1	1e-133	(Tarenaya hassleriana)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM6185	25	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60830.1	5e-48	basic leucine-zipper 70