PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010521423.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | WRKY | ||||||||
Protein Properties | Length: 380aa MW: 41171.8 Da PI: 9.7698 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98.6 | 4e-31 | 311 | 368 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 D y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYeg+Hnh+ XP_010521423.1 311 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVEREPDDPMMLIVTYEGDHNHS 368 99************************988****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF10533 | 1.8E-17 | 262 | 307 | IPR018872 | Zn-cluster domain |
Gene3D | G3DSA:2.20.25.80 | 4.6E-33 | 297 | 368 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 30.779 | 304 | 370 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 1.01E-26 | 305 | 369 | IPR003657 | WRKY domain |
SMART | SM00774 | 3.6E-37 | 309 | 369 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.0E-26 | 311 | 367 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 380 aa Download sequence Send to blast |
MVVFGGMAVE LMMSYGGVDR FSVTSAAAKV EETALREAAT AGIQGVEEFL RLIGHSQPKD 60 QKQPEITAVT DVVVNSFKKV MSLLGRSRTG HARFRRASLA PPPPQYPSPP ATMEEDILRR 120 EETQEPKVLE EGESFLSFRG FNGLKTEQKT EHVVAGGSAF RVYCPTPVHR LPPLPHNKNI 180 VVGGPSSSSH LPSLANGKTG LLDRSDGPST AINIAPSPPI SSLTGDTDSI QMSMSSSGFQ 240 FTSPSHISGS CGKPPLSSPS LKRRCNSLDE AALKCGSSSG RCHCSKKRKS RVRRVVRVPA 300 ISSKTADISP DDYSWRKYGQ KPIKGSPHPR GYYKCSSVRG CPARKHVERE PDDPMMLIVT 360 YEGDHNHSRA PPPPMLLESS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2ayd_A | 2e-20 | 297 | 371 | 2 | 75 | WRKY transcription factor 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010521423.1 |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010521423.1 | 0.0 | PREDICTED: probable WRKY transcription factor 7 isoform X2 | ||||
Swissprot | Q9STX0 | 1e-132 | WRKY7_ARATH; Probable WRKY transcription factor 7 | ||||
TrEMBL | A0A1R3I8H6 | 1e-134 | A0A1R3I8H6_COCAP; DNA-binding WRKY | ||||
TrEMBL | R0H0E1 | 1e-134 | R0H0E1_9BRAS; Uncharacterized protein | ||||
STRING | XP_010521422.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24240.1 | 1e-112 | WRKY DNA-binding protein 7 |