PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010521422.1
Organism
Tarenaya hassleriana
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
Family WRKY
Protein Properties Length: 381aa    MW: 41258.9 Da    PI: 9.7698
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010521422.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.64e-31312369359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +dp ++++tYeg+Hnh+
  XP_010521422.1 312 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVEREPDDPMMLIVTYEGDHNHS 369
                     99************************988****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105332.0E-16262308IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.804.6E-33298369IPR003657WRKY domain
PROSITE profilePS5081130.779305371IPR003657WRKY domain
SuperFamilySSF1182901.02E-26306370IPR003657WRKY domain
SMARTSM007743.6E-37310370IPR003657WRKY domain
PfamPF031061.0E-26312368IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MVVFGGMAVE LMMSYGGVDR FSVTSAAAKV EETALREAAT AGIQGVEEFL RLIGHSQPKD  60
QKQPEITAVT DVVVNSFKKV MSLLGRSRTG HARFRRASLA PPPPQYPSPP ATMEEDILRR  120
EETQEPKVLE EGESFLSFRG FNGLKTEQKT EHVVAGGSAF RVYCPTPVHR LPPLPHNKNI  180
VVGGPSSSSH LPSLANGKTG LLDRSDGPST AINIAPSPPI SSLTGDTDSI QMSMSSSGFQ  240
FTSPSHISGS CGKPPLSSPS LKRRCNSLDE AALKCGSSSG RCHCSKKSRK SRVRRVVRVP  300
AISSKTADIS PDDYSWRKYG QKPIKGSPHP RGYYKCSSVR GCPARKHVER EPDDPMMLIV  360
TYEGDHNHSR APPPPMLLES S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-20298372275WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010521422.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010521422.10.0PREDICTED: probable WRKY transcription factor 7 isoform X1
SwissprotQ9STX01e-130WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLR0H0E11e-132R0H0E1_9BRAS; Uncharacterized protein
STRINGXP_010521422.10.0(Tarenaya hassleriana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM17152887
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.11e-112WRKY DNA-binding protein 7