PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010521213.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 382aa MW: 43044 Da PI: 6.5258 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.5 | 5.1e-12 | 96 | 138 | 3 | 45 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 ++k +rr+++NReAAr+sR+RKka++++Lee +L++ ++L XP_010521213.1 96 ADKLQRRLAQNREAARKSRLRKKAYVQQLEESRLKLSQLEQEL 138 589****************************888887776655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-8 | 94 | 141 | No hit | No description |
SMART | SM00338 | 4.5E-4 | 94 | 154 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.312 | 96 | 140 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.9E-8 | 97 | 138 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.27E-6 | 98 | 141 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 101 | 116 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 5.1E-30 | 185 | 259 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 382 aa Download sequence Send to blast |
MSSSSPAQFA SFRNMGIYEP FQQIAAWGNS FKADMNNNGN SNNNTSPNTA SSTVIQVETR 60 TNDNNNTNNI NEVNYDFSHS PVEAEPSNDP SEGRVADKLQ RRLAQNREAA RKSRLRKKAY 120 VQQLEESRLK LSQLEQELQR ARQQGLYVRS SSDTSFLGPS GTMNTGIAAF EMEHAHWLEE 180 QNRRVSEIRT ALQAHISDIE LRMLVDSCLN HYGNLFRMKA DAAKADVFYL ISGMWRTSTE 240 RFFQWIGGFR PSELLNVVMP YLEPLTDQQI LEVRNLQQSS QQAEDALSQG IDKLQQGLAE 300 SIVLEPADSA NYGAHMAAAM ESLQGLEGFV NQADHLRQQT LQQMAKILTT RQAARGLLAL 360 GEYFHRLRAL SSLWAARPRE PT |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1 (By similarity). {ECO:0000250, ECO:0000269|PubMed:12953119}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00247 | DAP | Transfer from AT1G77920 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010521213.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010521212.1 | 0.0 | PREDICTED: transcription factor TGA7 isoform X1 | ||||
Swissprot | Q93ZE2 | 0.0 | TGA7_ARATH; Transcription factor TGA7 | ||||
TrEMBL | D7KV55 | 0.0 | D7KV55_ARALL; Predicted protein | ||||
STRING | XP_010521212.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G77920.1 | 0.0 | bZIP family protein |
Publications ? help Back to Top | |||
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