 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
XP_010520901.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
|
| Family |
NAC |
| Protein Properties |
Length: 304aa MW: 34163.2 Da PI: 6.688 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010520901.1 | genome | NCBI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 168.7 | 2e-52 | 14 | 139 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
lppGfrF Ptdeel+v+yL++kv+g+ ++l +vi e+d+yk++PwdLp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk + +
XP_010520901.1 14 LPPGFRFYPTDEELLVQYLCRKVAGHGFSL-QVIGEIDLYKFDPWDLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIISA- 106
79***************************9.99***************8777899*********************************999988. PP
NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
+g+ vg+kk Lvfy g+apkg+kt+W+mheyrl
XP_010520901.1 107 EGRRVGIKKALVFYAGKAPKGTKTNWIMHEYRL 139
9999***************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009414 | Biological Process | response to water deprivation |
| GO:0009737 | Biological Process | response to abscisic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 304 aa
Download sequence Send
to blast |
MGVREKDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHG FSLQVIGEID LYKFDPWDLP 60
SKALFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIISAEGRR VGIKKALVFY 120
AGKAPKGTKT NWIMHEYRLI EPSRTNNGSS KLDEWVLCRI YKKSTGAQKQ VPGQTYRERE 180
EHSMNGSLSS SASQLDDVLD SIPEINEQFF NLPRMNSLRS LLNDDKISNL DWATLAGLNP 240
VPDLVPNYTG NNSFVAADEE AESGLRNSDG LTHGSSGYNW VESGVNSVEP FGDGFSSHGF 300
WFRQ
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-107 | 1 | 169 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-107 | 1 | 169 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-107 | 1 | 169 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-107 | 1 | 169 | 4 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-107 | 1 | 169 | 7 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 1e-107 | 1 | 169 | 4 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 1e-107 | 1 | 169 | 4 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factors that bind specifically to the 5'-CATGTG-3' motif. {ECO:0000269|PubMed:15319476}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Strongly induced by drought, high salinity and abscisic acid (ABA). Slightly up-regulated by cold treatment. Not induced by jasmonic acid. {ECO:0000269|PubMed:15319476, ECO:0000269|Ref.7}. |
