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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
XP_010520705.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family |
MIKC_MADS |
Protein Properties |
Length: 240aa MW: 28028.9 Da PI: 8.472 |
Description |
MIKC_MADS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
XP_010520705.1 | genome | NCBI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | SRF-TF | 86.7 | 1.3e-27 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
ri+n + rqvtfskR+ng+lKKA ELS+LCda+v+ iifss+g+l++y+s
XP_010520705.1 10 RIDNATSRQVTFSKRKNGLLKKARELSILCDAQVCAIIFSSSGRLHDYAS 59
9***********************************************86 PP
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2 | K-box | 83 | 6.8e-28 | 80 | 171 | 7 | 98 |
K-box 7 ksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98
++++e + + +q+e++kL++ i+ L + +R+l+Ge+++ Ls+++L++Le+qLe+slk++R++K++ll +qi+ l +k + + ++n++L+kk+
XP_010520705.1 80 NHTSEITFQFWQREAEKLREHINHLNEYNRKLMGEEISGLSVNDLRNLENQLERSLKSVRARKEQLLADQIRVLTNKVNLVCQDNQELHKKV 171
55778889**********************************************************************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 240 aa
Download sequence Send
to blast |
MGRGKIVIQR IDNATSRQVT FSKRKNGLLK KARELSILCD AQVCAIIFSS SGRLHDYASS 60 SVKSVIERYN RMRAKDIEPN HTSEITFQFW QREAEKLREH INHLNEYNRK LMGEEISGLS 120 VNDLRNLENQ LERSLKSVRA RKEQLLADQI RVLTNKVNLV CQDNQELHKK VVLIGQENRD 180 LKTKVYELWD PNESDCECKP DKLGYNLNLP VHPQLSHEEL YSQERDQESE LSMKLRLQLD
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. |