PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010520068.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 311aa MW: 34704 Da PI: 9.9981 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 46 | 86 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L XP_010520068.1 46 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86 7889************************9877777766555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.0E-6 | 42 | 105 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.438 | 44 | 88 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.71E-7 | 46 | 89 | No hit | No description |
Pfam | PF00170 | 6.3E-7 | 46 | 86 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.1E-8 | 47 | 91 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 49 | 64 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.2E-32 | 128 | 200 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MADTSPRTSV STDADTDHRD QRFEGGQLGI VASDSSDRSK DKLDQKTLRR LAQNREAARK 60 SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGIFISSSG DQAHSTGGNG AMAFDVEYSR 120 WQEDKNRQMN ELRSAINAHA SDAELRIIVD GVMAHYEELF RIKSNAAKND VFHLLSGMWK 180 PPAERCFLWL GGFRSSELLK SSHQAEDALS QGMEALQQSL AETLSNGTLG SSGSSGNVAN 240 YMGQMAMAMG KLGTLEGFIR QADNLRLQTL QQMLRILTTR QSARALLAIH EYSSRLRALS 300 SLWLARPRDS A |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters (By similarity). {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010520068.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010520068.1 | 0.0 | PREDICTED: transcription factor TGA6-like isoform X2 | ||||
Swissprot | Q39140 | 0.0 | TGA6_ARATH; Transcription factor TGA6 | ||||
TrEMBL | E4MX78 | 0.0 | E4MX78_EUTHA; mRNA, clone: RTFL01-10-O14 | ||||
TrEMBL | V4KRR3 | 0.0 | V4KRR3_EUTSA; Uncharacterized protein | ||||
STRING | XP_010520066.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-150 | TGACG motif-binding factor 6 |