PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_010520061.1

Organism

Tarenaya hassleriana

Taxonomic ID

28532

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya

Family

bZIP

Protein Properties

Length: 463aa MW: 51310.8 Da PI: 7.1533

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010520061.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	34.7	4e-11	153	183	3	33
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee 33 + k rr+++NReAAr+sR+RKka++++Le XP_010520061.1 153 DTKTLRRLAQNREAARKSRLRKKAYVQQLES 183 57899************************96 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.2E-8	150	199	No hit	No description
SMART	SM00338	2.0E-6	151	215	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.726	153	197	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-8	154	184	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.17E-7	155	196	No hit	No description
CDD	cd14708	1.85E-21	155	207	No hit	No description
PROSITE pattern	PS00036	0	158	173	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	2.6E-30	247	321	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 463 aa Download sequence Send to blast
MQGHHPHHHQ LSASTSSSHG NFMNKDDGSY ELGDMDPTSL FLYLDAQGHQ DPSSTAPDHR 60 HHNLAMRPPT STLNIFPSQP MHVEPPASSS AKSESRLVLA EPRCSNRPSE PTMQLTNPAN 120 APPFQPEPSK SIKKEVNLKG HAPSHQERPK TPDTKTLRRL AQNREAARKS RLRKKAYVQQ 180 LESCRIKLTQ LEQEIQRARA QGVFFGGTLT GGDQQGLHIG PGNISSAEAA VFDMEYGRWL 240 EEQQRLLSEL RAAVEEQLPE NELRMFVDNV LGHYDQIVNL KAMVAKSDVF HLVSGAWKSP 300 AERCFMWLGG FRPSEIIKVV VNRIEPLTEQ QIVGICGLQQ STHEAEEALS QGLEALNQSL 360 SDTIASDSLS ASAVAAEATA TAAAFPPPPP TPSYISQMSL ALNKLSALEN FVLQADHLRH 420 QTVHRLHQLL TTHQAARSLL AIADYFHRLQ ALSSLWMARP RQD

Sequence ? help Back to Top

Protein Sequence Length: 463 aa Download sequence Send to blast

MQGHHPHHHQ LSASTSSSHG NFMNKDDGSY ELGDMDPTSL FLYLDAQGHQ DPSSTAPDHR  60
HHNLAMRPPT STLNIFPSQP MHVEPPASSS AKSESRLVLA EPRCSNRPSE PTMQLTNPAN  120
APPFQPEPSK SIKKEVNLKG HAPSHQERPK TPDTKTLRRL AQNREAARKS RLRKKAYVQQ  180
LESCRIKLTQ LEQEIQRARA QGVFFGGTLT GGDQQGLHIG PGNISSAEAA VFDMEYGRWL  240
EEQQRLLSEL RAAVEEQLPE NELRMFVDNV LGHYDQIVNL KAMVAKSDVF HLVSGAWKSP  300
AERCFMWLGG FRPSEIIKVV VNRIEPLTEQ QIVGICGLQQ STHEAEEALS QGLEALNQSL  360
SDTIASDSLS ASAVAAEATA TAAAFPPPPP TPSYISQMSL ALNKLSALEN FVLQADHLRH  420
QTVHRLHQLL TTHQAARSLL AIADYFHRLQ ALSSLWMARP RQD

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA9, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00491	DAP	Transfer from AT5G06839	Download

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010520061.1

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Strongly induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010520061.1	0.0	PREDICTED: transcription factor TGA2.2 isoform X2
Swissprot	E3VNM4	0.0	TGA10_ARATH; Transcription factor TGA10
TrEMBL	A0A3P5ZE78	0.0	A0A3P5ZE78_BRACM; Uncharacterized protein
STRING	XP_010520059.1	0.0	(Tarenaya hassleriana)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06839.3	0.0	bZIP family protein

Publications ? help Back to Top
Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]