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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010519883.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; Tarenaya
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Family | bZIP | ||||||||
Protein Properties | Length: 365aa MW: 41308 Da PI: 8.0406 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.6 | 4.2e-11 | 78 | 114 | 3 | 39 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 +k +rr+++NReAAr+sR+RKka++++Le+ +L XP_010519883.1 78 TDKIQRRLAQNREAARKSRLRKKAYVQQLETSRLKLI 114 5899**************************8655554 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-5 | 76 | 143 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.852 | 78 | 120 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.7E-8 | 79 | 109 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 4.66E-21 | 80 | 132 | No hit | No description |
SuperFamily | SSF57959 | 7.74E-7 | 80 | 120 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-7 | 82 | 108 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 83 | 98 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 4.4E-32 | 167 | 242 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 365 aa Download sequence Send to blast |
MNTTSTHFVP PRRVGIYEPL HQIGMWGENF KGNGTLNTPC PIIVPPDPKL DNMSEDTSHG 60 TAGTPHRFDQ EASTSRHTDK IQRRLAQNRE AARKSRLRKK AYVQQLETSR LKLIQLEQEL 120 DRARQQGFSI GGGVDAASSL SFSGSMNPGI GAFEMEYGHW VEEQNRQICE LRALLHGHAS 180 DIELRMLVDN VMKHYFELFR MKSAAAKADV FYVMSGMWKT SAERFFLWIG GFRPSELLKV 240 LLPHLDVLTE QQLLDVCNLR QSCQQAEDAL SQGMEKLQQT LAESVAAGQL GEGSYVPQMT 300 SAMERLEALV SFVNQADHLR HETLQQMYRI LTTRQAARGL MALGEYFQRL RALSSSWATR 360 QREPA |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010519883.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010519876.1 | 0.0 | PREDICTED: transcription factor TGA1-like isoform X4 | ||||
Refseq | XP_010519883.1 | 0.0 | PREDICTED: transcription factor TGA1-like isoform X4 | ||||
Refseq | XP_010519890.1 | 0.0 | PREDICTED: transcription factor TGA1-like isoform X4 | ||||
Refseq | XP_010519899.1 | 0.0 | PREDICTED: transcription factor TGA1-like isoform X4 | ||||
Swissprot | Q39237 | 0.0 | TGA1_ARATH; Transcription factor TGA1 | ||||
TrEMBL | A0A384L8H7 | 0.0 | A0A384L8H7_ARATH; TGA1 | ||||
TrEMBL | B9DGG1 | 0.0 | B9DGG1_ARATH; AT5G65210 protein | ||||
STRING | XP_010519853.1 | 0.0 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G65210.5 | 0.0 | bZIP family protein |