PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010112795.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 349aa    MW: 38875.3 Da    PI: 9.497
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010112795.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.92.3e-293693260
                    --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
            WRKY  2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
                    +DgynWrKYGqK vkg+e+ rsYYrCt+++C+vkk++e+s+ d ++v+i+Y g+H+h+k
  XP_010112795.1 36 QDGYNWRKYGQKLVKGNEYVRSYYRCTHPNCQVKKQLECSH-DRQIVDIVYFGHHDHPK 93
                    8***************************************9.***************85 PP
2WRKY1031.7e-32210268159
                     ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     ++Dg++WrKYGqK vkgs++prsYYrC+ +gCpvkk+ver+++d kvv++tYegeHnh 
  XP_010112795.1 210 VNDGHRWRKYGQKIVKGSPHPRSYYRCSNSGCPVKKHVERASHDAKVVITTYEGEHNHG 268
                     58********************************************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.8E-252993IPR003657WRKY domain
PROSITE profilePS5081120.7483094IPR003657WRKY domain
SuperFamilySSF1182902.48E-233193IPR003657WRKY domain
SMARTSM007746.5E-313593IPR003657WRKY domain
PfamPF031062.1E-223692IPR003657WRKY domain
Gene3DG3DSA:2.20.25.805.8E-36196270IPR003657WRKY domain
SuperFamilySSF1182901.7E-29202270IPR003657WRKY domain
PROSITE profilePS5081135.026205270IPR003657WRKY domain
SMARTSM007741.3E-38210269IPR003657WRKY domain
PfamPF031066.3E-27211267IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009863Biological Processsalicylic acid mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MPVPEKASQS PETGVLALKS VQEGSTPSII REKVAQDGYN WRKYGQKLVK GNEYVRSYYR  60
CTHPNCQVKK QLECSHDRQI VDIVYFGHHD HPKRHLNNNI PLAVGFVVST AEQRRKEPPL  120
TTTEDVSKNE RSLALTKTER VDIPPVTNIA ANDSPKGITQ SNKIKEVKSE DDPASKRQKK  180
DEHDHKTTSV DKPINEARLV VQTRSEVDIV NDGHRWRKYG QKIVKGSPHP RSYYRCSNSG  240
CPVKKHVERA SHDAKVVITT YEGEHNHGMP PTRIVTHNVP GSGTSPTAND GDTGTKSDAR  300
ALLEDKSESK EHANRELGTK SAVNETTGSN IESCPSPDSK TVKQENGKK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-3634271175WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element. {ECO:0000269|PubMed:8972846}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00094SELEXTransfer from AT2G04880Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010112795.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:17264121}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024032086.10.0WRKY transcription factor 1 isoform X1
RefseqXP_024032087.10.0WRKY transcription factor 1 isoform X1
RefseqXP_024032088.10.0WRKY transcription factor 1 isoform X1
SwissprotQ9SI374e-88WRKY1_ARATH; WRKY transcription factor 1
TrEMBLW9SZV20.0W9SZV2_9ROSA; WRKY transcription factor 1
STRINGXP_010112795.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF93583343
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G04880.22e-92zinc-dependent activator protein-1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Qiao Z,Li CL,Zhang W
    WRKY1 regulates stomatal movement in drought-stressed Arabidopsis thaliana.
    Plant Mol. Biol., 2016. 91(1-2): p. 53-65
    [PMID:26820136]
  3. Aamir M, et al.
    Structural and Functional Insights into WRKY3 and WRKY4 Transcription Factors to Unravel the WRKY-DNA (W-Box) Complex Interaction in Tomato (Solanum lycopersicum L.). A Computational Approach.
    Front Plant Sci, 2017. 8: p. 819
    [PMID:28611792]