PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111528.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 354aa    MW: 38990.2 Da    PI: 5.0984
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111528.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH322.1e-102773171055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_010111528.1 277 RKRREKINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 317
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.53E-14266331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.224267316IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-12272326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.5E-11273322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.06E-12276321No hitNo description
PfamPF000101.1E-7277317IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MDLLGGFSAG EWSPLNEIYN SEDHVDYDHD HDQLMAAHMD CAVANYNIIM GASSLEALPF  60
TIWPSNDSTI VHDVAGSTYN QDHAPKFGSS QIANYQPADT NSVASNVAFW GDRGANLFLI  120
NDHQWLNINH QEVSCNGEES GGSQTTAAHV VPQLKWEVPD QMMITVPDQL NMEDGSDLVS  180
GNSKKRSRSS TPDDQDPKKY KRNVVKPRKN KKLGLSDNEE DTSAGSGEHS DASHEDLGAG  240
MASSPSPSLK EAAAPNLNGK KRATRGSATD PQSIYARKRR EKINERLRIL QNLVPNGTKV  300
DISTMLEEAV QYVKFLQLQI KLLSSDDLWM YAPLAYNGMD IGLDHLRLAA PRQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1259279KKRATRGSATDPQSIYARKRR
2276281RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111528.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111528.10.0transcription factor bHLH84
TrEMBLW9SIP40.0W9SIP4_9ROSA; Transcription factor bHLH85
STRINGXP_010111528.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.12e-55bHLH family protein