PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010111527.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 301aa    MW: 33952.5 Da    PI: 10.1495
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010111527.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.38.4e-112252651055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r+RR++iN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  XP_010111527.1 225 RKRREKINERLKILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 265
                     9******************97.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474592.22E-14214279IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.281215264IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-13220275IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-11221270IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.18E-11224269No hitNo description
PfamPF000103.8E-8225265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    Send to blast
MGGKRQERQN LRWDLLTLIK LLRFCSTFVF GYIRQFLQLI HYLGEKLNSS PLAPCEGDVV  60
MRNNDQFLSV EGGHRHQCLN QDFVSNGNYG GNNQPAVSHN AMLHEELTVE NGSRFRNSYM  120
KRSRSTPIIP AEYGQDPKNK RNVKSRKNAA QKLAMSDYNE KDGNAKAPIS PNSFYSAGEY  180
PNASHEELGG VAWSSSPKGS PALNLNGKKR ATRGSATDPQ SVYARKRREK INERLKILQN  240
LVPNGTKVDI STMLEEAVQY VKFLQLQIKL LSSDDLRMYA PLAYNGMDIG LNLRNIFAPR  300
Q
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1207227KKRATRGSATDPQSVYARKRR
2224229RKRREK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010111527.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010111527.10.0transcription factor bHLH84
SwissprotQ7XHI91e-52BH084_ARATH; Transcription factor bHLH84
TrEMBLW9SGA00.0W9SGA0_9ROSA; Transcription factor bHLH84
STRINGXP_010111527.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF80733121
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-55bHLH family protein