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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010111075.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | WRKY | ||||||||
Protein Properties | Length: 742aa MW: 80997.1 Da PI: 6.5717 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 258 | 314 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnh XP_010111075.1 258 EDGYNWRKYGQKQVKGSEYPRSYYKCTHTDCQVKKKVERSH-DGQITEIIYKGSHNHA 314 7****************************************.***************7 PP | |||||||
2 | WRKY | 103.2 | 1.4e-32 | 477 | 535 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v++tYeg+Hnhe XP_010111075.1 477 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCSVRKHVERASHNLKFVITTYEGKHNHE 535 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.3E-28 | 246 | 316 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.01E-25 | 256 | 316 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.7E-35 | 257 | 315 | IPR003657 | WRKY domain |
Pfam | PF03106 | 6.6E-25 | 258 | 313 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 23.365 | 258 | 316 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 9.9E-36 | 462 | 537 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 7.06E-28 | 470 | 537 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 37.528 | 472 | 537 | IPR003657 | WRKY domain |
SMART | SM00774 | 4.7E-37 | 477 | 536 | IPR003657 | WRKY domain |
Pfam | PF03106 | 5.0E-25 | 478 | 535 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 742 aa Download sequence Send to blast |
MGEGQDWTSE DRKILIPTLG EEALGLMTAS NCGGAATSIA ERRAAKFGFN AVKISTPRFR 60 TTSPLASPAA RSPCLTIPEG ISPTALLDSP IMLPNTQVLP SPTTGKFLLP TFSQESSILH 120 STTREYLNKG NAIDSFRFKP YGENKSPPRC SSFGNQRTDA VDQAMVLDKP SVGFEFPTEF 180 AGETTIKQSL DFSNGVKFFD NAITDAKSVD MKVSPDVASD QTSLSRGTIH GEDDATHDPS 240 EGNHNVSNQA VGIARTSEDG YNWRKYGQKQ VKGSEYPRSY YKCTHTDCQV KKKVERSHDG 300 QITEIIYKGS HNHAKPQPNR RAVPGSGFSF DEMPEVSEGS GSCLKVEGRS GSVWTNVQSG 360 STSNKLGSNG RTDGMEIKSS ASVLTELSDP LSTAQGKSIG MIESTETPEL SSTVASDEDD 420 EDGAIQRSMS LGDDADDEEP ETKRRKKESS LIETSLTLRS VREPRVVVQI ESDVDILDDG 480 YRWRKYGQKV VKGNPNPRSY YKCTSAGCSV RKHVERASHN LKFVITTYEG KHNHEVPAAR 540 NSNHMNSSGA NVSPVTANSA QPALTLPRNT TIPKSETQIQ DLAPQFDRKP EFNNEYLRPS 600 FPVSFSNGAS SLYPMKFPPL QSFIPYASYG LNPNCIAIQQ SSSVTPVVPD FPMSLPLALP 660 PSGNLSLVGF DFNSRKPVAP IQPMLSGQRL QQNDVRFLRP KEEQKDDIHY DARVPLVDHA 720 NAASLSSYSS STAYNQIMGS FP |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 2e-33 | 247 | 538 | 2 | 78 | Probable WRKY transcription factor 4 |
2lex_A | 2e-33 | 247 | 538 | 2 | 78 | Probable WRKY transcription factor 4 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010111075.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010111075.1 | 0.0 | WRKY transcription factor SUSIBA2 | ||||
TrEMBL | W9S6X4 | 0.0 | W9S6X4_9ROSA; Putative WRKY transcription factor 2 | ||||
STRING | XP_010111075.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8349 | 34 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56270.1 | 1e-107 | WRKY DNA-binding protein 2 |
Link Out ? help Back to Top | |
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Entrez Gene | 21398241 |