PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110841.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 372aa    MW: 40519.1 Da    PI: 6.6823
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110841.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.83.2e-191766255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y GVr+++ +grWvAeI+d +    ++ r +lg+f+taeeAa+a++ a+++l+g
  XP_010110841.1 17 RYVGVRQRP-SGRWVAEIKDsV----QKVRLWLGTFDTAEEAARAYDDAARALRG 66
                    699******.7*********55....35*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.76E-211674No hitNo description
SMARTSM003805.3E-371780IPR001471AP2/ERF domain
PfamPF008471.7E-131766IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-201774IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.108.2E-291774IPR001471AP2/ERF domain
PROSITE profilePS5103221.0351774IPR001471AP2/ERF domain
PRINTSPR003672.1E-81829IPR001471AP2/ERF domain
PRINTSPR003672.1E-84056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    Send to blast
MVMMRSARKS WSRGQQRYVG VRQRPSGRWV AEIKDSVQKV RLWLGTFDTA EEAARAYDDA  60
ARALRGVNAR TNFQLPPNSH NHHHHPPPPE TLEPFSFEQL SNSSSSAPSN TTTDGLLGAL  120
KAKLLYHDSN TNTCISHAPS NTNTCISHAP SNTNTCISHA PSNTNTCISH APSNTNTCIS  180
HAPSNTNTCI NHAPSNTAPQ LLNNFRTPGT TSAGGKAQPS SSVPDQDHHH HHHQLPWPTN  240
NHEIIHVEAE GDIVHEVHNN VCAFPSDHTS HYYSSCGNIS NVLNTNIMDH GNNIVNIYGE  300
PNNISNIIGG VCYSSESDQH DQFEASDDHN IMMNGTFFGA ASNDCNNNNI TTAAASSSWD  360
PALFHYLSSI LG
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-151679468ATERF1
3gcc_A3e-151679468ATERF1
5wx9_A8e-1517811476Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110841.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9S6G10.0W9S6G1_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010110841.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.19e-13related to AP2 11