PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010110748.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | ERF | ||||||||
Protein Properties | Length: 228aa MW: 25290.3 Da PI: 9.0287 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53.5 | 5.9e-17 | 54 | 102 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +grWvAeI+d s ++ r +lg+f+t+e+Aa a+++a++ l+g XP_010110748.1 54 FLGVRQRP-SGRWVAEIKDSS---QKLRLWLGTFDTPEDAALAYDKAARLLRG 102 67******.7*********42...36***********************9998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 3.2E-34 | 53 | 117 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 1.1E-28 | 53 | 111 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 20.231 | 53 | 110 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 3.74E-31 | 53 | 112 | No hit | No description |
SuperFamily | SSF54171 | 1.05E-19 | 54 | 111 | IPR016177 | DNA-binding domain |
PRINTS | PR00367 | 3.7E-7 | 54 | 65 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 9.0E-11 | 56 | 102 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 3.7E-7 | 76 | 92 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 228 aa Download sequence Send to blast |
MDNLESSKIP SDHSQNQITK HSSTININGA EKFIHENGEG KRVMKINKGN IRRFLGVRQR 60 PSGRWVAEIK DSSQKLRLWL GTFDTPEDAA LAYDKAARLL RGRNAKTNFP NQGFLNSHEE 120 NCSILGKNPR LCQVLKHALM KNKARSNLSS SSLGSAIDIN RWRDRNMGEE FDSVSFDAIV 180 EETIVCSSSN EDGVDDDGQR NKLCTLSLGS SKVYSSVVVA PSFSASQC |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1gcc_A | 2e-16 | 52 | 110 | 1 | 60 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010110748.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010110748.1 | 1e-169 | ethylene-responsive transcription factor ERF010 | ||||
TrEMBL | W9SE25 | 1e-168 | W9SE25_9ROSA; Ethylene-responsive transcription factor | ||||
STRING | XP_010110748.1 | 1e-168 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12349 | 27 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 2e-28 | related to AP2 11 |
Link Out ? help Back to Top | |
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Entrez Gene | 21405066 |