PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110351.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family CPP
Protein Properties Length: 656aa    MW: 72054.3 Da    PI: 8.208
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110351.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR48.32e-15230268341
             TCR   3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 
                     +++CnCkk+kClk+YC+Cfaag +Cs+ C+C++C+N+ e
  XP_010110351.1 230 CNRCNCKKTKCLKLYCDCFAAGIYCSDPCSCQGCFNRPE 268
                     689*********************************876 PP
2TCR512.8e-16316354139
             TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 
                     ++kkgCnCkks ClkkYCeC++a++ Cs+ C+Ce+CkN 
  XP_010110351.1 316 RHKKGCNCKKSMCLKKYCECYQANVGCSSGCRCEGCKNV 354
                     589***********************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011142.1E-16228269IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.779229356IPR005172CRC domain
PfamPF036381.6E-11231266IPR005172CRC domain
SMARTSM011148.3E-18316357IPR033467Tesmin/TSO1-like CXC domain
PfamPF036381.5E-11318353IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 656 aa     Download sequence    Send to blast
MILKCANVPL YLLCLLEGIE NQRGMLRRCL QFEEAPPRTT GYSDSPLNLA NTVKSLKLST  60
SGHVELKETS ERLMVNSLQS AAPSLHPRSS EKFPMVSKPL GIGLHLNSII NVACTATAGE  120
KSTDHHICVR VMKSGTASNN LVGNTKSCPM KLRAVEKDSA SDEEIISVTK ASIVPSSVTN  180
EFHHTAEDHD AAPDENGKSN SHNADNFEEH DQPSPRKKRK KTSTGGGDGC NRCNCKKTKC  240
LKLYCDCFAA GIYCSDPCSC QGCFNRPEYE KTVIETREQI ESRNPLAFAP KIVQRIPELP  300
PNHGEDGYRS TPSSARHKKG CNCKKSMCLK KYCECYQANV GCSSGCRCEG CKNVYGRKEE  360
YAAMEHGVTR EMVGNRKLES TFDKELEIVG TKRDLLCTES INPHNLTPLT PSFQYSDHGK  420
DAPKSRFISR RYLPSPDSAI LSSNEKTKSP PRDLEKSDVL LEVSEELPDE GSYEWQVDYN  480
VGIADSSSSR NDSVPSVPHL TQHPDTSVPM ASATSFRRDY RNLSQNQLCP GSARLLSNSM  540
RRHGSPLAPM TRLCEATKSR QGLDSGSVQL VDILEDETPV KVSSPNKKRV SPPHSHIFEL  600
GSGSSGKLKS GRKFILKSVP SFPPLTPCID SKGSTSENTH KLQGDSVKSQ NVTVNP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A5e-1923335414121Protein lin-54 homolog
5fd3_B5e-1923335414121Protein lin-54 homolog
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216220KKRKK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110351.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024030508.10.0protein tesmin/TSO1-like CXC 2
TrEMBLW9S4Z90.0W9S4Z9_9ROSA; Uncharacterized protein
STRINGXP_010110351.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF85652841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22780.16e-59Tesmin/TSO1-like CXC domain-containing protein