PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Cis-element |

Regulation |

Orthologous Group |

Basic Information? help Back to Top

TF ID

XP_010109557.1

Organism

Morus notabilis

Taxonomic ID

981085

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus

Family

GeBP

Protein Properties

Length: 427aa MW: 47460.4 Da PI: 4.7618

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_010109557.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	122.7	1.8e-38	170	264	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 f r+wse+Dei++L+G+ d+kak+g++p++d+ af++f+kks++++vsksqlv+KirrLKkK+ ++ +k +++++p+fsk+h+ +f+lskkiWg XP_010109557.1 170 FARVWSEDDEIAVLKGMTDYKAKKGADPYADMGAFHDFIKKSLNADVSKSQLVDKIRRLKKKYLNNAAKGENDEDPVFSKPHELLSFKLSKKIWG 264 89********************************************************************************************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF04504	5.0E-34	170	264	IPR007592	Protein of unknown function DUF573

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence Send to blast
MAPKRLFEKP PPADSSLEDE YESDPADNEE KNGKGNENGS AGADDEEEKS GGDEAEEDES 60 PVKKPTVSKS DDSGSGSDTE SDDTPPSPSL SGFTIKPIVS RPMDDTADKH KKKSSVRPNK 120 RATESEDPES ETSEKDSKRK KKRKVTSASA SVTASKGGGD EEDSKKSLGF ARVWSEDDEI 180 AVLKGMTDYK AKKGADPYAD MGAFHDFIKK SLNADVSKSQ LVDKIRRLKK KYLNNAAKGE 240 NDEDPVFSKP HELLSFKLSK KIWGIGANKS PNGNNVEDSD LKSRSRLKTP VPSTPVSKST 300 TTVLALPNKE MSVKKEKKKR EQVEANGKVR VEKEEEDEDE EEEEEADEEG EEEEEFWDKY 360 PHLNKSLESC FSSEFKISLP LVETSKLEKI DKKWRELQIE ELGLFVRKAH LSQEQAELVL 420 GVLKRSV

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence Send to blast

MAPKRLFEKP PPADSSLEDE YESDPADNEE KNGKGNENGS AGADDEEEKS GGDEAEEDES  60
PVKKPTVSKS DDSGSGSDTE SDDTPPSPSL SGFTIKPIVS RPMDDTADKH KKKSSVRPNK  120
RATESEDPES ETSEKDSKRK KKRKVTSASA SVTASKGGGD EEDSKKSLGF ARVWSEDDEI  180
AVLKGMTDYK AKKGADPYAD MGAFHDFIKK SLNADVSKSQ LVDKIRRLKK KYLNNAAKGE  240
NDEDPVFSKP HELLSFKLSK KIWGIGANKS PNGNNVEDSD LKSRSRLKTP VPSTPVSKST  300
TTVLALPNKE MSVKKEKKKR EQVEANGKVR VEKEEEDEDE EEEEEADEEG EEEEEFWDKY  360
PHLNKSLESC FSSEFKISLP LVETSKLEKI DKKWRELQIE ELGLFVRKAH LSQEQAELVL  420
GVLKRSV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	137	143	KRKKKRK
2	139	144	KKKRKV

Cis-element ? help Back to Top
Source	Link
PlantRegMap	XP_010109557.1

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010109557.1	0.0	STOREKEEPER protein
TrEMBL	W9SD90	0.0	W9SD90_9ROSA; Uncharacterized protein
STRING	XP_010109557.1	0.0	(Morus notabilis)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF13966	11	19

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61730.1	3e-29	DNA-binding storekeeper protein-related transcriptional regulator

Link Out ? help Back to Top
Entrez Gene	21401267