PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109483.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 572aa    MW: 64525.4 Da    PI: 5.369
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109483.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.11.3e-10441489348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WTteE  +lvd+v q G g+W+ I r +     +Rt  ++k++w+++l
   XP_010109483.1 441 SWTTEEVVKLVDGVSQCGVGRWTEIKRLLFssaSHRTSVDLKDKWRNLL 489
                      5**********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.536434493IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.7E-12435494IPR009057Homeodomain-like
SuperFamilySSF466891.08E-15436495IPR009057Homeodomain-like
SMARTSM007176.5E-10438491IPR001005SANT/Myb domain
PfamPF002492.3E-7441489IPR001005SANT/Myb domain
CDDcd116603.49E-19442490No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MFTCKPYEVD ADMPIFPASE DEPVVLEHFL VEPPCKEDWV SGLLDLDAFQ IEKSFNIEDI  60
SSTFDYDQIK LDTDAVHTML PKGEEKSLEF PSEASQGINF GGSEENHFDT KHADKAVKSD  120
DGSCNKSSCL GNVGLENQSQ SVHKTGSDEE MVKLSSTSMP VLNYTYNHHP SLLDQAAAKE  180
LDEAFKNISG HETLLIDKNW PNKNNLYGLE NYAQLETSLN LMKFEEISTE SEDKTIFLSI  240
VDYCASSTIP VTGPLNSESI SGQQQMKRKR VDGCESIKTS TSDVSKIEFC SDEGYRAEPL  300
VSPKRSRKPP RRYIEESLEY ESKSNNKKCG IGKRSKDRIL YDRYPKYKWQ NAEHMVYEDD  360
SFNGGCIQVP FGLPMEREQP HPKKNKSSLG SGVSKENRLL DPSERFDVAL IVESQEDISE  420
DECVARSFTA KGSTRRKRHI SWTTEEVVKL VDGVSQCGVG RWTEIKRLLF SSASHRTSVD  480
LKDKWRNLLR ASCTQLQIKE KFTYPSKLMQ VDQGRKQATN FVPESILWRV RELAVIYPYP  540
RDSRSKVSCI IPAVSSFPAS TSNALVPLST AV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109483.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029955.10.0uncharacterized protein LOC21390901
RefseqXP_024029956.10.0uncharacterized protein LOC21390901
TrEMBLW9SRL60.0W9SRL6_9ROSA; Telomere repeat-binding protein 4
STRINGXP_010109483.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF150181313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.18e-25TRF-like 6