PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109447.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 294aa    MW: 32898.4 Da    PI: 4.6042
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109447.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.16.2e-20108157255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +++GVr+++ +grW+AeIrdp     r +r++lg+++taeeAa  +++a+ +++g
  XP_010109447.1 108 KFRGVRRRP-WGRWAAEIRDPL----RrTRIWLGTYDTAEEAAMVYDKAAIRIRG 157
                     89*******.**********73....45*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.107.7E-30107165IPR001471AP2/ERF domain
SMARTSM003801.1E-35108171IPR001471AP2/ERF domain
PfamPF008471.9E-13108157IPR001471AP2/ERF domain
CDDcd000183.17E-31108164No hitNo description
PROSITE profilePS5103223.881108165IPR001471AP2/ERF domain
SuperFamilySSF541715.04E-22108166IPR016177DNA-binding domain
PRINTSPR003672.3E-10109120IPR001471AP2/ERF domain
PRINTSPR003672.3E-10131147IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MGSVKLTEHR TVTRKLVKSS SSSASASKFF TRVVRISVTD EDATDSSSGE EEEESSTMRV  60
VKRHVNEVRI EEFYSEASRN SRPEIVRNGR KTAAVRCSSE EYFPKGRKFR GVRRRPWGRW  120
AAEIRDPLRR TRIWLGTYDT AEEAAMVYDK AAIRIRGPDA LTNFGSSCSD YSSDDAVLVS  180
DEFSESSQAV CSPTSVLRFR PLESKPGQLE SGTTSGEKWN LAEDFLLLDS DFLGDCLYKE  240
SPPPLFAVDE VGVPAAIPEE EYGDVLVDLD GDFGSCKWDV DHYFQDPLGI EELS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-20105164262ATERF1
3gcc_A2e-20105164262ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109447.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109447.10.0pathogenesis-related genes transcriptional activator PTI6
TrEMBLW9S2J10.0W9S2J1_9ROSA; Ethylene-responsive transcription factor CRF4
STRINGXP_010109447.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45034161
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.13e-40cytokinin response factor 4