PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109419.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 400aa    MW: 42977.8 Da    PI: 5.5072
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109419.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.8e-10273321355
                     HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      +h+ +Er RR++i +++  L+el+P +    +k   Ka +L + ++Y++sLq
  XP_010109419.1 273 NSHSLAERVRREKISERMRLLQELVPGC----NKITGKAVMLDEIINYVQSLQ 321
                     58**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-17268337IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.00E-11268325No hitNo description
PROSITE profilePS5088815.485270320IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16271338IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.5E-7273321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-10276326IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009637Biological Processresponse to blue light
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MSGQENENVG FQQSRSEGFL NCPSSRMATN TMPEKASGVT MSSLSMFKPP TGSDPFFASG  60
WDPLVSLSQT ENFGGSSMVT QGEFCNPPYN NPVVLESQGM SSTSHLVQYP SDSSFAEMVP  120
KLSCFGSGSF SDMVGSFGLP QCAGIASTGC PPNYPPNSET TSTVGGQSQD GCQISDGGIG  180
SSPNEKRRKR VPDFNSPLSP DKNAEGEQVQ QKDSSISDVR KEQDEKKPKI EENSSGNARN  240
KQTGKQAKDS ADSGETPKEN YIHVRARRGQ ATNSHSLAER VRREKISERM RLLQELVPGC  300
NKITGKAVML DEIINYVQSL QQQVEFLSMK LATVNPELNI DIERLLSKDI LNSRGGNGAL  360
FGLGPGIGSS QHYPPGIFQG TMPSIPNTAP QFASLPQASS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00135DAPTransfer from AT1G10120Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109419.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109419.20.0transcription factor bHLH74
RefseqXP_024029922.10.0transcription factor bHLH74
RefseqXP_024029923.10.0transcription factor bHLH74
TrEMBLW9SAE60.0W9SAE6_9ROSA; Uncharacterized protein
STRINGXP_010109419.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF75853345
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10120.14e-71bHLH family protein