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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010109365.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 203aa MW: 23695.5 Da PI: 4.3044 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 80 | 5.1e-25 | 31 | 158 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lp G+rF P d el+ +yL +k+ +++l++ ++ik +d+y+++P +Lp k ++ +e++ ++F++++ ++ +++ +t++g W + g++++++ XP_010109365.1 31 LPSGYRFLPDDYELIIYYLLNKILHRRLPV-DAIKVLDLYTCDPDKLPiKDFELsTENKAHYFMETRDTHV--EQNVITTENGEWVQNGEEEAIH 122 699***************************.99***************75444424457788887766543..34555899************** PP NAM 94 skkgelvglkktLvfy.kgrapkgektdWvmheyrl 128 + +++ vg kk+ f k ++p+ +t+W+++e rl XP_010109365.1 123 HGDNTIVGFKKVRHFQwKISSPEVCETQWIINELRL 158 *99999*********9677**************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.58E-25 | 24 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.08 | 31 | 175 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.4E-12 | 32 | 158 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 203 aa Download sequence Send to blast |
MAENQYGGAE FDNLLSKSSV EVQLNLEDLH LPSGYRFLPD DYELIIYYLL NKILHRRLPV 60 DAIKVLDLYT CDPDKLPIKD FELSTENKAH YFMETRDTHV EQNVITTENG EWVQNGEEEA 120 IHHGDNTIVG FKKVRHFQWK ISSPEVCETQ WIINELRLNI GVIPDQILMN NNIMKEFQRL 180 NSLYIDQEDE DKNEDDNAVN LGV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010109365.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | W9SCT5 | 1e-148 | W9SCT5_9ROSA; NAC domain-containing protein 29 | ||||
STRING | XP_010109365.1 | 1e-149 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15772 | 6 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G46590.1 | 4e-18 | NAC domain containing protein 96 |
Link Out ? help Back to Top | |
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Entrez Gene | 21390078 |