PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109127.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 275aa    MW: 30134.4 Da    PI: 5.9693
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109127.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44.1e-19147197255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ taeeAa a+++a+  ++g
  XP_010109127.1 147 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETAEEAALAYDRAAFGMRG 197
                     7********.***********9987..**********************99987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.3E-32146206IPR001471AP2/ERF domain
CDDcd000181.81E-31147206No hitNo description
PfamPF008478.2E-14147197IPR001471AP2/ERF domain
SuperFamilySSF541716.02E-23147207IPR016177DNA-binding domain
PROSITE profilePS5103223.947147205IPR001471AP2/ERF domain
SMARTSM003802.6E-38147211IPR001471AP2/ERF domain
PRINTSPR003676.5E-11148159IPR001471AP2/ERF domain
PRINTSPR003676.5E-11171187IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MMEAIPGDFI ASQYQPYQNP SSNNTSAAAT TTTLIPCLTD QWGDLPLRVN DSDDMIVYNS  60
LHDAVSFGWS PSDLTPEISE IKPEPIYSFD LANPTTELAV PGVYTASSHA LEIHNLQNTL  120
FSFQSENRER GKNGDVTNRR GGTRGRHYRG VRQRPWGKFA AEIRDPAKNG ARVWLGTYET  180
AEEAALAYDR AAFGMRGSKA LLNFPHRIGS GEPPPVRITA KRRECSDHAS GGSFKKVKGS  240
LAGNGDVESE QRSLDVFQVG PDSSFLLRGD ELLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-37143212170ATERF1
3gcc_A1e-37143212170ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtActs as a transcriptional activator and may be involved in disease resistance pathways. Binds to the GCC-box pathogenesis-related promoter element. Involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways mediated by ethylene, that seems to depend on a protein kinase cascade, and to be influenced by methyl-jasmonate. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:10792818, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109127.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by ethephon (ethylene-releasing compound) in buds and to a lower extent in leaves. Strongly induced by cycloheximide and mechanical stimuli. Wounding leads to a both local and systemic expression, independently of ethylene, and through a de-novo-protein-synthesis-independent regulation. Wound induction is reduced by methyl-jasmonate. Induction by purified xylanase from Trichoderma viride (TvX) and another elicitor from Phytophthora infestans (PiE), that appears to be mediated by both protein kinases and protein phosphatases. {ECO:0000269|PubMed:10652129, ECO:0000269|PubMed:12090623, ECO:0000269|PubMed:7756828, ECO:0000269|Ref.2}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109127.10.0ethylene-responsive transcription factor 2
SwissprotQ404794e-71ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLW9SQP80.0W9SQP8_9ROSA; Ethylene-responsive transcription factor 2
STRINGXP_010109127.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22393382
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-39ethylene responsive element binding factor 1
Publications ? help Back to Top
  1. Nakano T,Nishiuchi T,Suzuki K,Fujimura T,Shinshi H
    Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells.
    Plant Cell Physiol., 2006. 47(4): p. 554-8
    [PMID:16452120]