PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108843.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 1077aa    MW: 122478 Da    PI: 5.0713
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108843.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.22.9e-31832231128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......lelee..v.ikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra.......tk 79 
                     lp+G++F+P+deelv  +L++k+++++      ++  e    ++  +iy  +P++Lp  +k++ ++++fF+k  ++yatg+rk+r+       ++
  XP_010108843.1  83 LPAGVKFEPSDEELV-VHLAAKCDSDSikphmfID--EfiPtLEGEGIYCDHPENLP-GAKKDGSSIHFFHKIINAYATGQRKRRKvqnhgstAE 173
                     799************.78*******9966554322..2222366668**********.556778899******************7577777656 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+++v++ +g ++g +k++v+y  +++ +k+ kt+Wvmh+y+l
  XP_010108843.1 174 QVRWHKTGKSRPVIE-NGLQKGWRKIMVLYetSKKGSKPDKTKWVMHQYHL 223
                     899************.999***********5434667778*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.1E-3568242IPR003441NAC domain
PROSITE profilePS5100532.283242IPR003441NAC domain
PfamPF023652.5E-1384223IPR003441NAC domain
PROSITE profilePS5129517.853612709IPR001890RNA-binding, CRM domain
SuperFamilySSF754711.44E-19613707IPR001890RNA-binding, CRM domain
Gene3DG3DSA:3.30.110.603.3E-15614707IPR001890RNA-binding, CRM domain
PfamPF019851.2E-16614698IPR001890RNA-binding, CRM domain
SMARTSM011033.8E-17614698IPR001890RNA-binding, CRM domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003723Molecular FunctionRNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1077 aa     Download sequence    Send to blast
MPLYSVSEPS ALDISEAQGR STDETFSLRL ISWLINSRGL AKKVKNAACS PSYQIKDCGA  60
SRECPNCHCR IDNSDVSPEW PGLPAGVKFE PSDEELVVHL AAKCDSDSIK PHMFIDEFIP  120
TLEGEGIYCD HPENLPGAKK DGSSIHFFHK IINAYATGQR KRRKVQNHGS TAEQVRWHKT  180
GKSRPVIENG LQKGWRKIMV LYETSKKGSK PDKTKWVMHQ YHLGTEEDEK EGEYVVSKIY  240
YKQPKQPEIY DNNSNCHLIE ESDTKALQTS PMTPNSNPPI PPRHGKSILT DDIADNTLPQ  300
SSSKEEEGGR TQEALLDPQT NNIEAEEALL DPQTNKEALL DPQTNNIEAE EALLDPQTNK  360
EALLDPQTNN IEAEEALLDP QTNNVEAEDD MGYPAWLAGE SQAIDNSGLN SIDDSLLCKE  420
RLDSGCNYIS NTDFTGNNKS TGENIAPCGI SDLENLELDT PPDFHLPDLQ FCSQESILDW  480
LDRTISVSRD FSAKIISSNV VQPSKPREDG LLFSSSSSSS SAMVNPFDVR HRSMSTARGG  540
SMRSKVEKRM KKESGKTLRE IRRAKKIQKK LMTESERLIY NLKRAKKKVA LLLQKLKKYE  600
LPELPQPRHD PELLTQEQLQ AYKKIGFKNK NYVPVGVRGV FGGVVQNMHL HWKFHETVQV  660
CCDNFPKEKI KEMATMIARL SGGIVINIHN VKTIIMFRGR NYRQPKNLIP INTLTKRKAL  720
FKARFEQALE SQKLNIKKFE QQLRRSGINP EDPVATASIQ RVASSFFNAI DKKEGTPYVF  780
REDKLSATEP NNIFEPTEPS DEKEQEELDK FIAEIEDAAE REWAAEEAAE KEDFGRIRYL  840
NREEFGGRFR RSETFRDDGS DGEINRSRSW KDTRGEQRTY ESDDDDEVDA SEADDEWQSH  900
NARDAGNFDS GSDDSDENEK FKAPSRNRGR QENFGRARYN DGYKRNSSMN FRRSIVEEES  960
ETENVLGNLE NAMWQSDSEE KHNPSASRPM NYEYRSDSDE EDSYDLKGGK GGKITHEYRS  1020
DTDDSEGESQ ASRFGKYNYR SSGDEEEKYQ VKRAARNESD IRRTRTTKQM DEDWDSD
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108843.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024029528.10.0uncharacterized CRM domain-containing protein At3g25440, chloroplastic
TrEMBLW9S0R60.0W9S0R6_9ROSA; NAC domain-containing protein 8
STRINGXP_010108843.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF982434
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.14e-82NAC domain containing protein 44