PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108068.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 278aa    MW: 31789.8 Da    PI: 6.9034
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108068.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.33.6e-1097148154
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                     +++ h e E++RR+++   ++ Lr+l+P       ++K s ++   +A ++Ik+L
  XP_010108068.1  97 KKVVHRETEKQRRREMAALYDSLRSLIPLeY---LKGKRSISDQIHEAANHIKDL 148
                     6789*************************77...9******************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.05E-794148No hitNo description
SuperFamilySSF474591.1E-1295171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088812.68496148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.1E-1097169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000103.1E-797148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MDYIPSMFQY DQATDQELLQ LISTFHCKLY QNDHQYHLHH EIHEDDHDQV YPPAASQDGH  60
DLISLKRRRQ SIVPFCEKDN HRHDDHHQNP NGDKKKKKVV HRETEKQRRR EMAALYDSLR  120
SLIPLEYLKG KRSISDQIHE AANHIKDLGK KIEKLSEKRD ELRKLSKYLV VSTPSGSSSI  180
GDDIASDHDQ NSETTISVVH CKAGVEVVVN TAFKQGLPLA TVLQVLVAEG LNVVSCVSAK  240
VNERFLHTIE SEAVSGVRSV DLTELEQKLK NLIRYSEC
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010108068.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010108068.10.0transcription factor bHLH36
TrEMBLW9S6M40.0W9S6M4_9ROSA; Uncharacterized protein
STRINGXP_010108068.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79233125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51780.11e-36bHLH family protein