PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107919.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bHLH
Protein Properties Length: 363aa    MW: 39674.2 Da    PI: 6.7347
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107919.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.26.1e-13139182855
                     HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                      Er RR+++++ f++L  llP++     +K +K++i+ +Av+YI+ Lq
  XP_010107919.1 139 TERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIRTLQ 182
                     6*********************6....39******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.738131181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.23E-16132200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.8E-15135193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.94E-11136179No hitNo description
PfamPF000103.2E-10139182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-9139187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550212.46E-8279352No hitNo description
Gene3DG3DSA:3.30.70.2602.9E-5282348No hitNo description
PROSITE profilePS516718.535284360IPR002912ACT domain
CDDcd048736.17E-7285323No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008152Biological Processmetabolic process
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0016597Molecular Functionamino acid binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MSEEGFAIVG NEMGFLWEEN ECNWANNLSN NSSPTGGAGY TGTADEEEEE KSEGKKMKSS  60
NGGGGPKANK GKEGAPQGNN KKKRSRGGVC KNNNGKSSTI TTTTTSTGDL DDHDHHDQIT  120
KEGKKVGGGE SDHEIHIWTE RERRKKMRNM FANLHALLPQ LPPKADKSTI VDEAVNYIRT  180
LQQTLQKLQK QKLEKLQGAT TSSTTISSFN CEPSLISQQK VAYKDTREAF LADQGSCNEL  240
VTMGNNINNP SSNSLSVVSQ FSPVMFQTWT SSNVVLNICG DQAHISICSP RKPGLLTSIC  300
YALEKHKITL VSAQISSDGD RNMYMIHAHH ASNGASDQFL EAFNPVEEVF KQAVGEIMLW  360
VSS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107919.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024028928.10.0transcription factor bHLH95
TrEMBLW9SMI50.0W9SMI5_9ROSA; Uncharacterized protein
STRINGXP_010107919.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.18e-42bHLH family protein