PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107751.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 299aa    MW: 33553.9 Da    PI: 5.9905
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107751.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.5e-19151201255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+++AeIrdp+     +r++lg+f+ta +Aaka+++a+ +l+g
  XP_010107751.1 151 HYRGVRQRP-WGKFAAEIRDPTRK--GTRVWLGTFDTAIDAAKAYDRAAFRLRG 201
                     8********.**********8542..4*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.2E-32150210IPR001471AP2/ERF domain
CDDcd000184.23E-32150209No hitNo description
SMARTSM003805.5E-38151215IPR001471AP2/ERF domain
SuperFamilySSF541711.18E-22151210IPR016177DNA-binding domain
PfamPF008472.0E-13151201IPR001471AP2/ERF domain
PROSITE profilePS5103224.012151209IPR001471AP2/ERF domain
PRINTSPR003671.5E-13152163IPR001471AP2/ERF domain
PRINTSPR003671.5E-13191211IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000302Biological Processresponse to reactive oxygen species
GO:0001944Biological Processvasculature development
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009644Biological Processresponse to high light intensity
GO:0010200Biological Processresponse to chitin
GO:0051301Biological Processcell division
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    Send to blast
MASFDEVSKL QFIKQHLLGD LSPMSTNFSF GQLPNFAPQN PNFFEFNSDI ESKPEILDLL  60
TPKPFNLTSQ SSENSFEFES KPEIADSFEF ESKPQRLPPK PGFDPSSPSN RKRSLKISLP  120
EKTQWIQFEA ATNPEPAVQE QPAAAEKEKK HYRGVRQRPW GKFAAEIRDP TRKGTRVWLG  180
TFDTAIDAAK AYDRAAFRLR GSKAILNFPL EAGKSTSIGN GGDGGKTVEM KRRREEEEEE  240
VKTVVAVKKE KLTESDDALS YLRDMPLTPS NWTAVWDSDV KGIFSVPPLS PLSPLLMVV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A3e-31150211465ATERF1
3gcc_A3e-31150211465ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:9756931}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00437DAPTransfer from AT4G17490Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107751.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107751.10.0ethylene-responsive transcription factor 6
SwissprotQ8VZ916e-66EF103_ARATH; Ethylene-responsive transcription factor 6
TrEMBLW9T2R90.0W9T2R9_9ROSA; Ethylene-responsive transcription factor 6
STRINGXP_010107751.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108534109
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17490.12e-48ethylene responsive element binding factor 6