PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010107122.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 571aa MW: 63750.5 Da PI: 4.4523 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 108.7 | 6.8e-34 | 9 | 134 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikev.diykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 lppG+rF+Ptdeel++++L+ k+ + ++++ i+ev d++ ++Pw+L+ k k++++++ +fFs+rd k+ kr++r+tk+g+Wk tgk++e+ XP_010107122.1 9 LPPGYRFRPTDEELMNHFLRLKMIRGCSDVDDDIAEVdDVCMWDPWELRlKsKIESDDQISWFFSRRDPKN---KRTKRKTKTGFWKITGKEQEI 100 79********************99999999999****99*********853377777777799*9999875...69******************* PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyr 127 + ++g+++g kk+ vf +g +p g+ tdWv+hey+ XP_010107122.1 101 KGRDGRVIGKKKIVVFLTGPTP-GRGTDWVIHEYH 134 *****************88776.589********8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.44E-36 | 7 | 154 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 39.672 | 9 | 155 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.2E-19 | 10 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 571 aa Download sequence Send to blast |
MSLSVPRNLP PGYRFRPTDE ELMNHFLRLK MIRGCSDVDD DIAEVDDVCM WDPWELRLKS 60 KIESDDQISW FFSRRDPKNK RTKRKTKTGF WKITGKEQEI KGRDGRVIGK KKIVVFLTGP 120 TPGRGTDWVI HEYHPLPENV LPNQSYYVIC RLENKAVEKA GPPGCDDSEP SCDITSDVEN 180 SVASAAISEV HGQAEGNAEL LPQHFQYHDI ASDVENSVAS VAISEVHGQA EGNAESLPQQ 240 VLSSDDCFLT DEEINFLNAC LDNDHTQLMP EHHPETENSL LHQVYSYFLT GIAIADYRVR 300 PDITHCLESK TDENAGTLGC NIGKPSSDIR AETENSVAHP AISEVSGHGE RNAKLLSQPV 360 LSLDDCLTME DLTPSLSDSF NDGQKSNWVM HEHRPELENS LPQQWPYLTC CLENKTDEYV 420 GSLDCNIGRP SSDITSDIEN QVAHTAIPVG DGHTEVNAES CWQTFSSPDY YYTEEAISLI 480 RSYSLCDDHN NSHALCGSAE PIMCPAEFPD GRKADLYENY NGETANNLSN DFIQPKSLKR 540 PYFPDIPASN DTNAEGVDGW VKRPRSLALG E |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 8e-20 | 8 | 158 | 14 | 171 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010107122.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028454.1 | 0.0 | NAC domain-containing protein 60 | ||||
Refseq | XP_024028455.1 | 0.0 | NAC domain-containing protein 60 | ||||
TrEMBL | W9RW14 | 0.0 | W9RW14_9ROSA; NAC domain-containing protein 1 | ||||
STRING | XP_010107122.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.1 | 2e-26 | NAC 014 |
Link Out ? help Back to Top | |
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Entrez Gene | 21402539 |