PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010107116.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 141aa MW: 16509.3 Da PI: 10.2606 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 115.9 | 4e-36 | 11 | 137 | 2 | 115 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 ++GfrF Ptdeel+ +yL++k+ g++ e+e+vi+evd yk+ePwdLp+ ++k++++ w fF+krd k++++kr +r+tk+g+Wk XP_010107116.1 11 AAGFRFYPTDEELIADYLRPKILGTHPEVEDVIAEVDFYKFEPWDLPRfcslfsfiepksRIKSKDRTWLFFCKRDCKKPRSKRLKRSTKTGFWK 105 68*********************************************6699******9998999999**************************** PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapk 115 tgk+ ++++ +++ +g +ktLvf+kg +p XP_010107116.1 106 ITGKEMVIKDQeTKKCIGKRKTLVFHKGPTPG 137 ********99856666**********987664 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.79E-35 | 8 | 138 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 36.755 | 10 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.0E-18 | 12 | 135 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 141 aa Download sequence Send to blast |
MSITELPPGM AAGFRFYPTD EELIADYLRP KILGTHPEVE DVIAEVDFYK FEPWDLPRFC 60 SLFSFIEPKS RIKSKDRTWL FFCKRDCKKP RSKRLKRSTK TGFWKITGKE MVIKDQETKK 120 CIGKRKTLVF HKGPTPGQTT N |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-22 | 1 | 141 | 12 | 134 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-22 | 1 | 141 | 12 | 134 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-22 | 1 | 141 | 12 | 134 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-22 | 1 | 141 | 12 | 134 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swm_B | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swm_C | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swm_D | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swp_A | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swp_B | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swp_C | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
3swp_D | 3e-22 | 1 | 141 | 15 | 137 | NAC domain-containing protein 19 |
4dul_A | 2e-22 | 1 | 141 | 12 | 134 | NAC domain-containing protein 19 |
4dul_B | 2e-22 | 1 | 141 | 12 | 134 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010107116.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028447.1 | 6e-79 | NAC domain-containing protein 45 | ||||
TrEMBL | W9RVU8 | 7e-99 | W9RVU8_9ROSA; NAC domain-containing protein 74 | ||||
STRING | XP_010107116.1 | 1e-99 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G03200.1 | 2e-33 | NAC domain containing protein 45 |
Link Out ? help Back to Top | |
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Entrez Gene | 21402533 |