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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010107114.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 337aa MW: 38518.2 Da PI: 5.1877 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 140.7 | 8.4e-44 | 11 | 139 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ++GfrFhPtd el+++yL++k+ g++ ++++vi+evd +k+ePwdLp +k++++++ w fF krd ky+++kr++r+tk+g+Wk tgk++ +++ XP_010107114.1 11 AKGFRFHPTDAELITDYLRPKLLGRDSDVDKVIAEVDFCKFEPWDLPpqSKIESKDRMWLFFGKRDYKYPSSKRSKRTTKEGFWKITGKERVIKD 105 68***************************99***************86459999999*************************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g k+tLvf+kg +p ++t+Wvmhey + XP_010107114.1 106 QeTKKCIGKKRTLVFHKGPTPG-QRTNWVMHEYYI 139 856666**********887775.9*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.45E-46 | 8 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 48.44 | 10 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.0E-22 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 337 aa Download sequence Send to blast |
MVIIELPPGM AKGFRFHPTD AELITDYLRP KLLGRDSDVD KVIAEVDFCK FEPWDLPPQS 60 KIESKDRMWL FFGKRDYKYP SSKRSKRTTK EGFWKITGKE RVIKDQETKK CIGKKRTLVF 120 HKGPTPGQRT NWVMHEYYIE PHLLPNQRSY VLCRLKEKAN DKANTPDSGE GNPCGDITSE 180 VENPVTPAAI PSVQFQVHGH AEGNAESPSQ LVSSPDGFLT EVEMSSILED CLNDDQNTQF 240 VHENHPNPEN SLPHQVTQFT EEFPEEIMDR LSADPDADPY TKYYGEAAYN PFIDRIPQAS 300 FWRPYNEDGL VRSDTNTEGV NEQVKRSHLL ALGECLQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-31 | 4 | 158 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-31 | 4 | 158 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-31 | 4 | 158 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-31 | 4 | 158 | 15 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swm_B | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swm_C | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swm_D | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swp_A | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swp_B | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swp_C | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
3swp_D | 8e-31 | 4 | 158 | 18 | 168 | NAC domain-containing protein 19 |
4dul_A | 7e-31 | 4 | 158 | 15 | 165 | NAC domain-containing protein 19 |
4dul_B | 7e-31 | 4 | 158 | 15 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010107114.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010107114.2 | 0.0 | NAC domain-containing protein 91 isoform X1 | ||||
TrEMBL | W9S3Y9 | 0.0 | W9S3Y9_9ROSA; NAC domain-containing protein 74 | ||||
STRING | XP_010107114.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 6e-49 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Entrez Gene | 21402531 |