PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010107113.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | NAC | ||||||||
Protein Properties | Length: 452aa MW: 51701.5 Da PI: 6.4509 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 146.5 | 1.4e-45 | 2 | 130 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 ++GfrFhPtdeel+++yL++k+ g++ ++++vi+evd +k+ePwdLp + k+k++++ w fF+krd ky+++kr++r+tk+g+Wk tgk++ +++ XP_010107113.1 2 AKGFRFHPTDEELITDYLRPKLLGRDSDVDDVIAEVDFCKFEPWDLPsQsKIKSKDRMWLFFCKRDYKYPSSKRSKRTTKEGFWKITGKERMIKD 96 68********************************************96258899999*************************************9 PP NAM 95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ +g k+tLvf+kg +p ++t+Wvmhey + XP_010107113.1 97 QeTKKCIGKKRTLVFHKGPTPG-QRTNWVMHEYYI 130 856666**********887775.9*********76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 50.042 | 1 | 150 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.7E-47 | 3 | 149 | IPR003441 | NAC domain |
Pfam | PF02365 | 7.2E-24 | 3 | 129 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence Send to blast |
MAKGFRFHPT DEELITDYLR PKLLGRDSDV DDVIAEVDFC KFEPWDLPSQ SKIKSKDRMW 60 LFFCKRDYKY PSSKRSKRTT KEGFWKITGK ERMIKDQETK KCIGKKRTLV FHKGPTPGQR 120 TNWVMHEYYI EPHNLLPNQR SYVLCRLKEK ANDKANTPDS GEGNRSASEA ENPVTPAAIP 180 SAAHGNEVNQ ESFSQSLQSP VFTNEEISLP SPVGSSRDRN GMQAPYGAGE PEEPPEEMVD 240 RLIADSDADP YPKYYWESAY NPFNDRIPQA SSWSPYYVDG LVRSDTNTEG VNEQKHSSLF 300 NSPAGSNKFR HLQMDETTCG ELQCCYVSIR DQFSEEDDSY VNIASGGFST EESPNYVPFS 360 RRRCQRRIQL QDRDSSTAIS RNKVRESETH NSLSLSEYCF FPIKKRMWPE HHCLLDHARS 420 HAAAAMFAPP WHTGISGLPS QIAEWDATWC VS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 7e-31 | 4 | 150 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 7e-31 | 4 | 150 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 7e-31 | 4 | 150 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 7e-31 | 4 | 150 | 20 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 7e-31 | 4 | 150 | 20 | 165 | NAC domain-containing protein 19 |
4dul_B | 7e-31 | 4 | 150 | 20 | 165 | NAC domain-containing protein 19 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010107113.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024028463.1 | 0.0 | protein NTM1-like 9 | ||||
TrEMBL | W9SKD1 | 0.0 | W9SKD1_9ROSA; NAC domain-containing protein 69 | ||||
STRING | XP_010107113.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.1 | 4e-50 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Entrez Gene | 21402530 |