PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105730.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 429aa    MW: 47418.9 Da    PI: 5.9831
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105730.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.51.7e-30246304259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers+ dp+++++tY+geH+h+
  XP_010105730.1 246 SDLWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNVDPDLFIVTYTGEHTHP 304
                     699************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.809.1E-31234306IPR003657WRKY domain
PROSITE profilePS5081133.43240306IPR003657WRKY domain
SuperFamilySSF1182902.75E-26241306IPR003657WRKY domain
SMARTSM007743.0E-37245305IPR003657WRKY domain
PfamPF031068.5E-26247304IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007263Biological Processnitric oxide mediated signal transduction
GO:0009739Biological Processresponse to gibberellin
GO:0042742Biological Processdefense response to bacterium
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 429 aa     Download sequence    Send to blast
MADDWDLYAV VRSCKSSATT ASSMVSTAKT TSSEEEESSS NSTNTTLSWL ASLTFEEEND  60
PFSFPKLGEP RNNAFQELQQ FFFKPACFFP NPTTTTTSRD IIPNSSINPN LGGSSGQQQH  120
HHHHHHHREQ QYKHLMPQNG VVGTAQLVSP QSGFGGNFHV DQQRQPQVQQ QQQQQQQQQK  180
EQNNQLLLPQ QVHQAGFHAS NGTFAPTTLP LQMPLPPNLP TNPRSRKRKN QLKKQVCQVT  240
AENLNSDLWA WRKYGQKPIK GSPYPRNYYR CSSSKGCAAR KQVERSNVDP DLFIVTYTGE  300
HTHPRPAHRN SLAGSTRAKT TTATATTTAA VSSCSSPQSG ASQSPTTPLS TAQIADEEAV  360
SVAVKRDAEE EEEDNEKIGD GGEECLVEGE EEDIDDENIL IPNNNIMGLT DDFFYGFQQL  420
GYSPPGAAC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B2e-19234306679Disease resistance protein RRS1
5w3x_D2e-19234306679Disease resistance protein RRS1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00561DAPTransfer from AT5G52830Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105730.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010105730.10.0probable WRKY transcription factor 27
TrEMBLW9SGS60.0W9SGS6_9ROSA; Putative WRKY transcription factor 27
STRINGXP_010105730.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-53WRKY DNA-binding protein 27