PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105603.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 266aa    MW: 29701.5 Da    PI: 7.9779
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105603.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.11.6e-1667116255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+ +AeIrdp     + +r++lg+f+tae Aa a+++a+++++g
  XP_010105603.1  67 HYRGVRQRP-WGKGAAEIRDPQ----KaARVWLGTFDTAEAAALAYDEAALRFKG 116
                     7********.9*********93....36***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-3066125IPR001471AP2/ERF domain
SMARTSM003805.7E-3567130IPR001471AP2/ERF domain
CDDcd000186.09E-1967125No hitNo description
PROSITE profilePS5103223.30167124IPR001471AP2/ERF domain
PfamPF008478.1E-1167116IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-2067125IPR016177DNA-binding domain
PRINTSPR003673.5E-106879IPR001471AP2/ERF domain
PRINTSPR003673.5E-1090106IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MSAIVSALSR VMGSNDHMVG QHQSHPLQMH GNPSISTDNS SMALQHHQSQ PLQEDQGNKR  60
STITRRHYRG VRQRPWGKGA AEIRDPQKAA RVWLGTFDTA EAAALAYDEA ALRFKGSKAK  120
LNFPERVQGG TFTNPSISTE LGYSNFSTTT NNILINQDSA ANSATNPPYY PPITQYPNQY  180
HTAFQYGQFI QSTGDSTTTN VSYNDPQSFY GGQYQRLDNN NLPQVSMIST QQQEELLRLP  240
MQFGSSSSTI SDPFRSRRDY NSNDDH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-2766130469ATERF1
3gcc_A2e-2766130469ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105603.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010105603.10.0ethylene-responsive transcription factor ERF113
TrEMBLW9SGE50.0W9SGE5_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010105603.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.12e-32ERF family protein