PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105601.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 260aa    MW: 29090.8 Da    PI: 7.2534
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105601.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.4e-2061110255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     +y+GVr+++ +g+W+AeIrdp     + +r++lg+f+tae Aa a+++a+++++g
  XP_010105601.1  61 HYRGVRQRP-WGKWAAEIRDPQ----KaARVWLGTFDTAEAAALAYDEAALRFKG 110
                     7********.**********93....36***********************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.103.9E-3360119IPR001471AP2/ERF domain
PfamPF008472.1E-1461110IPR001471AP2/ERF domain
PROSITE profilePS5103224.97461118IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-2261119IPR016177DNA-binding domain
SMARTSM003803.6E-3861124IPR001471AP2/ERF domain
CDDcd000182.37E-2161119No hitNo description
PRINTSPR003671.3E-116273IPR001471AP2/ERF domain
PRINTSPR003671.3E-1184100IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    Send to blast
MSAIVSSLSR VMGSNDHMVG QHQSHPLQMH GNPSITTDNS GMAQPLQEDQ GNTRSTITRR  60
HYRGVRQRPW GKWAAEIRDP QKAARVWLGT FDTAEAAALA YDEAALRFKG SKAKLNFPER  120
VQGGTFTNTS ISTELGYSNF STTTNNILIN QDSAANTATN PPYYPPITQY PNQYHTAFQY  180
GQFIQSTGDS TTTNVSYNDP QSFYGGQYQR LDNNNLPQVS MISTQQQEEL LRLPMQFGSS  240
SSTISDPFRS RRDYNSNDDH
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A4e-2860124469ATERF1
3gcc_A4e-2860124469ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105601.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010105601.10.0ethylene-responsive transcription factor ERF113
TrEMBLW9RRP30.0W9RRP3_9ROSA; Ethylene-responsive transcription factor
STRINGXP_010105601.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98534115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07310.11e-34ERF family protein