PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010105512.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family MYB_related
Protein Properties Length: 737aa    MW: 81374.2 Da    PI: 6.626
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010105512.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.3e-08624672348
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 
                      +WT  E  +lv++v + G g+W+ I r        Rt  ++k++w+++l
   XP_010105512.1 624 AWTLVEVMKLVEGVSKCGAGRWSEIKRLSFasySYRTSVDLKDKWRNLL 672
                      7**************************99999*99************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.377617676IPR017930Myb domain
SuperFamilySSF466892.37E-15619683IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.4E-12619679IPR009057Homeodomain-like
SMARTSM007171.5E-8621674IPR001005SANT/Myb domain
CDDcd116608.64E-20623673No hitNo description
PfamPF002491.5E-5624672IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009651Biological Processresponse to salt stress
GO:0046686Biological Processresponse to cadmium ion
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 737 aa     Download sequence    Send to blast
MQTQRTKTAS QNYVFAVQSL ARSHQSVSSI KISAFVPQKL LPFYYATRFP QLSLGRSDTV  60
LVLRFPLAHH SHQSYVVGVD NNSDEGKFEE CGVEKSSSCL SSPKYIADPV VYKLVRVDGD  120
GRFVPATDDE VMEVEDFLVD DKTEMIDVAD IGKTADCTSN EGSDSGKLQL EVSEGLSHSE  180
NVEAHAEKLT SEFENIEEVS QKVKEEEGLS ISCGSPDNSD ACMNVDSKCA DQHYESPAVE  240
EKLQFEIPMQ ETVPSSTPRV NDHCNDLSES IGEFYKPPSG QAESGPSTSA VCNNSKPDFS  300
KLEEEICLDN LSIRELHEFF RATFGRETTV KDKLWLKRRI AMGLTNSCDV ATTTFTIKDN  360
KLVNKGNEEN CKNTNAAFTE DSRVEAVLVS PKNSPTNHST QREDHKIALG ERFHDNAELD  420
CGSDDLHTEE RAAKRVRKPT RRYIEELSEA ETRDCSPKVH NSVKNIGCGQ TSQKFCLRPI  480
KSVSLNERIM LTRLDSLGGS GIEVPCVSRV RRSRPRKNIK ALMKFHPSSL GMAAEVVKVL  540
AVPSSLANSE CTDKVSKSRS ASETTEPLLT SEAVKDKQSS ATGKVQVGKN LGLKHTDSSE  600
DTSDDNTATV RTAKGGMRRK HHRAWTLVEV MKLVEGVSKC GAGRWSEIKR LSFASYSYRT  660
SVDLKDKWRN LLKASLAQTP PDEGMNSRKH ASVPIPAPIL LRVRELAEMH SQVPPNLGSN  720
MGGVGGRSMH ETRSGYL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1510516RRSRPRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010105512.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024027390.10.0uncharacterized protein LOC21386182 isoform X1
RefseqXP_024027391.10.0uncharacterized protein LOC21386182 isoform X1
TrEMBLW9RRR90.0W9RRR9_9ROSA; Telomere repeat-binding protein 6
STRINGXP_010105512.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF78493040
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.21e-118TRF-like 6