PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_010105032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26953.1 Da PI: 9.5726 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38 | 3e-12 | 82 | 125 | 8 | 55 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 rEr RR ++N++f+ L +++P++ +K sK +L+ ++eYIk+L+ XP_010105032.1 82 RERDRRVKMNESFALLESIVPSL----LPKSSKEKVLQTTTEYIKYLE 125 8*********************5....49*****************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 12.144 | 74 | 124 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 4.2E-6 | 80 | 130 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.67E-6 | 82 | 123 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 4.5E-13 | 82 | 138 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.14E-12 | 82 | 149 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 8.2E-10 | 82 | 125 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence Send to blast |
MEKEGKRKVK EEEQEKEEEK DISKLVLGIM EGYSDSVIPP LSHFQSPRSE SAINVVAEYN 60 SSSKRKRENI RPKPPKEDCL GRERDRRVKM NESFALLESI VPSLLPKSSK EKVLQTTTEY 120 IKYLEEKKKM LEKLKESSRS PMAATRSLVF PCTSRNSSVT VTACGSVALF GIESRKRHGF 180 VTQIFMVFQK HRAEVLAANV VVNDGLLTLT VTAFVNGDES TTIEGIKRDI LMLKNLDGV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | XP_010105032.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | W9RQ46 | 1e-173 | W9RQ46_9ROSA; Uncharacterized protein | ||||
STRING | XP_010105032.1 | 1e-174 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF14330 | 13 | 14 |
Link Out ? help Back to Top | |
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Entrez Gene | 21391838 |