PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104605.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 352aa    MW: 38997.8 Da    PI: 10.4715
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104605.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix48.62.2e-1543130186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspk...qCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  + +Liea  e+  +l+rg+lk+++W+ev++ +  ++ ++++pk   qCk++++ ++k+yk +k+    +  +  s++p++d+l+
  XP_010104605.1  43 CWSEGATAVLIEAWGERYLELSRGNLKQKHWKEVADIVsIREDYTKTPKtdiQCKNRIDTVKKKYKLEKAKIAAG--GGPSKWPFYDRLD 130
                     7*************************************856666665543339*****************99997..67778******98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.9E-2641132No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0010431Biological Processseed maturation
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MEEDDEIQSH LSPRSGSPAS PRPVGRITTR NGGGGGGGGR EDCWSEGATA VLIEAWGERY  60
LELSRGNLKQ KHWKEVADIV SIREDYTKTP KTDIQCKNRI DTVKKKYKLE KAKIAAGGGP  120
SKWPFYDRLD HLIGPTAKIS GSGSHAVAAL ANAASQQQAQ KVPLGIPVGV RRVSPFHGQQ  180
RDQKPQLQLK NQKIQFKRRG GPVDSGSSRE ASPASTDSFP FDVYERKRPR TAREMNMNMN  240
MNMNSNLNSN PAVRDGGREK KGWGSAVKEL TQAILKFGEA YEQAESSKLQ QVVEMEKQRM  300
KFAKDLELQR MQFFMKTQLE ISQLKHGRRG GGIGNASNHH SNNNNNNSDS SN
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00356DAPTransfer from AT3G14180Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104605.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026698.10.0trihelix transcription factor ASIL2
RefseqXP_024026700.10.0trihelix transcription factor ASIL2
SwissprotQ9LJG82e-93ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLW9SDN30.0W9SDN3_9ROSA; Uncharacterized protein
STRINGXP_010104605.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF79193044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14180.11e-48sequence-specific DNA binding transcription factors