PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104523.1
Common NameDREB4B
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 210aa    MW: 23256 Da    PI: 6.1542
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104523.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.92.9e-192169355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    y+GVr +k +g+Wv+eIr+p   gk++r++lg++ t+e+Aa+a++ a++ l+g
  XP_010104523.1 21 YRGVRKRK-WGKWVSEIREP---GKKTRIWLGSYETPEMAAAAYDVAALHLRG 69
                    9****999.**********8...557*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.5E-131969IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-222077IPR016177DNA-binding domain
SMARTSM003804.4E-372083IPR001471AP2/ERF domain
PROSITE profilePS5103223.5122077IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.5E-322078IPR001471AP2/ERF domain
PRINTSPR003671.2E-122132IPR001471AP2/ERF domain
CDDcd000181.77E-222179No hitNo description
PRINTSPR003671.2E-125979IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    Send to blast
MEDRDHQQVA QFARHVAPPA YRGVRKRKWG KWVSEIREPG KKTRIWLGSY ETPEMAAAAY  60
DVAALHLRGR GARLNFPELS DSLPRPASSC GEDVQMAAQQ AALLLKSSRP SPPPSEAAAP  120
NDKSSDSGGA VKSCSVPVTV GLSASQIQAI NESPLDSPKM WMQMAEALLF ADHHYNHYCY  180
ATSSLIFNDD DDVIKFSEFE EIQHNSIWDN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A3e-162177360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104523.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783930.0KF678393.1 Morus notabilis dehydration responsive element binding transcription factor (DREB4B) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104523.11e-156ethylene-responsive transcription factor ERF022
SwissprotQ9LQ285e-50ERF22_ARATH; Ethylene-responsive transcription factor ERF022
TrEMBLW6FTF61e-155W6FTF6_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010104523.11e-156(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF17773191
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33760.12e-41ERF family protein