PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104393.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 304aa    MW: 34083.4 Da    PI: 9.7484
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104393.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.54.8e-1527118187
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                     +W+ + + +Li+a  e+  +l+rg+l++++W+ev++++        + +r+ +qCk++++ l+k+yk +k++ ++   + +s +p+f +l+a
  XP_010104393.1  27 CWSADATFTLIDAWGERYLELKRGNLRQKHWQEVADAVnsdhcDGPKSRRTDIQCKNRIDTLKKKYKIEKARVSDSDGTYVSPWPFFARLDA 118
                     7*************************************877656666789************************99999999*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.9E-2625119No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    Send to blast
MDSDTGTPSP AKAPLARTTP FSGREDCWSA DATFTLIDAW GERYLELKRG NLRQKHWQEV  60
ADAVNSDHCD GPKSRRTDIQ CKNRIDTLKK KYKIEKARVS DSDGTYVSPW PFFARLDALI  120
GATFPVAKKL SPLLATAAGG YRNPSPPSWA RYSPVPVGPR SATLKRPAPP APFAVDYEGS  180
ARNFSAFAAA AVAALAEEEA EDEESDRSGS RSSMKSRGRD EREREPMYRE LAKAIERFGE  240
IYQRVEVAKQ RQMVELEKQR MQFAKDLEFQ RMQLFMETQV QLQKIKRAKR SPGAGEPSSS  300
LPSF
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator that may repress the maturation program during early embryogenesis. {ECO:0000269|PubMed:21330492}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00413DAPTransfer from AT3G58630Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104393.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010104393.20.0trihelix transcription factor ASIL1 isoform X1
RefseqXP_024026543.10.0trihelix transcription factor ASIL1 isoform X2
SwissprotQ9LJG82e-37ASIL2_ARATH; Trihelix transcription factor ASIL2
TrEMBLW9RZ450.0W9RZ45_9ROSA; Uncharacterized protein
STRINGXP_010104393.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.11e-52sequence-specific DNA binding transcription factors