PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103666.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family WRKY
Protein Properties Length: 360aa    MW: 41026.6 Da    PI: 4.9355
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103666.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY74.11.7e-23132192259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dg +WrKYGqK++ ++++pr+Y+rCt +   gC+++k+v++ +++pk+ +itY g+H+++
  XP_010103666.1 132 EDGQAWRKYGQKDILNAQYPRAYFRCTRKydqGCRATKQVQQIQDNPKLYKITYIGQHTCR 192
                     8**************************998899**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.6E-23121193IPR003657WRKY domain
SuperFamilySSF1182902.22E-22130192IPR003657WRKY domain
SMARTSM007743.1E-35131193IPR003657WRKY domain
PROSITE profilePS5081118.946131189IPR003657WRKY domain
PfamPF031068.3E-23132192IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEEKDEKGEN LDEPKSRSGG SDAPRGSGFD VVGLGTEPWI QELQQSSFSC HFRSSYNNPH  60
NKNDNPDDIN IVGGEINGPE ASVLDHSQCG DRSSEDSGEI STKKRPALKD RRGCYKRRKS  120
SQSWTKITAN LEDGQAWRKY GQKDILNAQY PRAYFRCTRK YDQGCRATKQ VQQIQDNPKL  180
YKITYIGQHT CRNLQKAPQM IISDFHEYPW DISNSNYKAT IASDHIDHSP RSTTTSSTIF  240
PNNFSKSATA KLMEQDDHQD HDHDQVKEET PNDDHDDNAS LDTHDHNSLW PNEFKDLELS  300
VGLLSPKNMR TSDNDRDVVS VVFSFEDRKG AATSDNDLDM DDFVVKCIDF RDFDETEFPI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-25127192469OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102118KKRPALKDRRGCYKRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103666.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026046.10.0probable WRKY transcription factor 35
TrEMBLW9RLV60.0W9RLV6_9ROSA; Putative WRKY transcription factor 70
STRINGXP_010103666.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.12e-38WRKY DNA-binding protein 70