PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103645.1
Organism
Morus notabilis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family bZIP
Protein Properties Length: 360aa    MW: 39945.2 Da    PI: 6.8559
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103645.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.2e-10157213561
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                     kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l   +     l s
  XP_010103645.1 157 KRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSS 213
                     9****************************************9998877666655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-15153217IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.691155218IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.1E-10157212No hitNo description
SuperFamilySSF579591.53E-10157208No hitNo description
PfamPF001704.7E-9157214IPR004827Basic-leucine zipper domain
CDDcd147032.98E-23158207No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MEMRDPSKPD PGPNPNSENQ ASRFPHAMTT SFHRPSPGLP ARGSYHRRAQ SEVQFRLPDD  60
LDLLSDPFDG PSGSFEELGS EDDLFSTYMD IEKFGSKLND GPAAAPKPDN AGGGEEKNAR  120
PRHRHSNSVD CSNLETIEAK KAMAPDKLAE LWTLDPKRAK RILANRQSAA RSKERKARYI  180
TELERKVQTL QTEATTLSAQ LTLFQRDTTG LSSENTELTL RLQAMEQQAH LRDALNEALK  240
KEVERLKIAT GETLTHTDTY NFGMHHIPYS SQSSFFSNQH QAGRGDTRNI QMPQFNPLQS  300
NNVSTTHQPM LSAAYSHASE TLQLDPIGRL QGLDISNRGS HLVKPEGPSI SAGEGSSNRF
Functional Description ? help Back to Top
Source Description
UniProtTranscrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00303DAPTransfer from AT2G40620Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103645.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103645.10.0transcription factor RF2b
SwissprotO228731e-118BZP18_ARATH; bZIP transcription factor 18
TrEMBLW9RLD20.0W9RLD2_9ROSA; Transcription factor RF2b
STRINGXP_010103645.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15483497
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.11e-113bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Pawar V, et al.
    A novel family of plant nuclear envelope-associated proteins.
    J. Exp. Bot., 2016. 67(19): p. 5699-5710
    [PMID:27630107]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  5. Babiychuk E,Fuangthong M,Van Montagu M,Inzé D,Kushnir S
    Efficient gene tagging in Arabidopsis thaliana using a gene trap approach.
    Proc. Natl. Acad. Sci. U.S.A., 1997. 94(23): p. 12722-7
    [PMID:9356517]