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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
XP_010102532.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
|
| Family |
C2H2 |
| Protein Properties |
Length: 292aa MW: 32448.9 Da PI: 8.2448 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| XP_010102532.1 | genome | BGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.5 | 0.00044 | 226 | 248 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp Cg Fs+ +L+ H + H
XP_010102532.1 226 ECPQCGAKFSSVTTLVEHVEKvH 248
5*****************99888 PP
|
| 2 | zf-C2H2 | 15.9 | 3.8e-05 | 264 | 286 | 2 | 23 |
EETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 2 kCpdCgksFsrksnLkrHirt.H 23
+Cp+C++ F+++ L+ H + H
XP_010102532.1 264 VCPKCSRGFRDPVALVEHVERdH 286
7*****************99888 PP
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| Protein Features
? help Back to Top |
 |
| Database |
Entry ID |
E-value |
Start |
End |
InterPro ID |
Description |
| SuperFamily | SSF118310 | 2.49E-13 | 4 | 59 | No hit | No description |
| Gene3D | G3DSA:4.10.1110.10 | 4.2E-11 | 10 | 53 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS51039 | 7.93 | 10 | 56 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00154 | 1.3E-5 | 13 | 52 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 1.3E-14 | 13 | 51 | IPR000058 | Zinc finger, AN1-type |
| Gene3D | G3DSA:4.10.1110.10 | 8.7E-11 | 91 | 155 | IPR000058 | Zinc finger, AN1-type |
| SuperFamily | SSF118310 | 1.33E-8 | 93 | 146 | No hit | No description |
| PROSITE profile | PS51039 | 8.005 | 98 | 151 | IPR000058 | Zinc finger, AN1-type |
| SMART | SM00355 | 160 | 99 | 129 | IPR015880 | Zinc finger, C2H2-like |
| SMART | SM00154 | 0.048 | 101 | 142 | IPR000058 | Zinc finger, AN1-type |
| Pfam | PF01428 | 1.3E-7 | 101 | 141 | IPR000058 | Zinc finger, AN1-type |
| PROSITE profile | PS50157 | 9.868 | 225 | 253 | IPR007087 | Zinc finger, C2H2 |
| SMART | SM00355 | 0.019 | 225 | 248 | IPR015880 | Zinc finger, C2H2-like |
| Pfam | PF13894 | 6.4E-4 | 226 | 248 | No hit | No description |
| PROSITE pattern | PS00028 | 0 | 227 | 248 | IPR007087 | Zinc finger, C2H2 |
| Gene3D | G3DSA:3.30.160.60 | 5.2E-4 | 229 | 248 | IPR013087 | Zinc finger C2H2-type/integrase DNA-binding domain |
| SMART | SM00355 | 6.7 | 263 | 286 | IPR015880 | Zinc finger, C2H2-like |
| PROSITE profile | PS50157 | 8.538 | 263 | 291 | IPR007087 | Zinc finger, C2H2 |
| PROSITE pattern | PS00028 | 0 | 265 | 286 | IPR007087 | Zinc finger, C2H2 |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MGTPEFPNLG KHCAVDDCKQ IDFLPFTCDR CNLVFCLEHR SYIKHNCPKA DRQDVTVVIC 60
PLCAKGVRLI PDEDPNITWD THVNTDCDPS NYEKVTKKKK CPVPGCKEIL TFSNTLKCRD 120
CLVDHCLKHR FGPDHKCPGP KKPESNFPFM GLLNRSRKEE QRPNKAPATS SPKWATNFLN 180
AASSVRASAE ASMMKLSNEI SQKWQIAKDS VGQSSGNSGR NGEIEECPQC GAKFSSVTTL 240
VEHVEKVHER DGNRPGGKKV TVDVCPKCSR GFRDPVALVE HVERDHGGTS RA
|
| Functional Description ? help
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| Source |
Description |
| UniProt | May be involved in environmental stress response. {ECO:0000250}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By cold, dehydration and salt stress. {ECO:0000269|PubMed:17033811}. |
